Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03535 and BSU23770

See Amino acid alignment / Visit BSNT_03535 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:22
# Commandline: needle
#    -asequence dna-align/BSNT_03535___dsdA.1.22522.seq
#    -bsequence dna-align/BSU23770___dsdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03535___dsdA-BSU23770___dsdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03535___dsdA-BSU23770___dsdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03535___dsdA
# 2: BSU23770___dsdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1347
# Identity:    1328/1347 (98.6%)
# Similarity:  1328/1347 (98.6%)
# Gaps:           0/1347 ( 0.0%)
# Score: 6564.0
# 
#
#=======================================

BSNT_03535___      1 ATGTCAGTTCATTCAGAAGTCCTTCATGCTCTGCTTAAAGATCCGTTTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds      1 ATGTCAGTTCATTCAGAAGTCCTTCATGCTCTGCTTAAAGATCCGTTTAT     50

BSNT_03535___     51 ACAGAAACTGATTGATGCAGAGCCTGTATTCTGGGCAAATTCAGGCAAGA    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds     51 TCAGAAACTGATTGATGCAGAGCCTGTATTCTGGGCAAATTCAGGCAAGA    100

BSNT_03535___    101 AAGAGGGGCCATTACCCCGTGCAGATGAGTGGGCAACCGAGATAGCGGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds    101 AAGAGGGGCCATTACCCCGTGCAGATGAGTGGGCAACCGAGATAGCGGAA    150

BSNT_03535___    151 GCGGAAAAAAGAATGCGGCGGTTTGCACCTTACATTGCCGAGGTGTTTCC    200
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU23770___ds    151 GCGGAAAAAAGAATGCAGCGGTTTGCACCTTACATTGCCGAGGTGTTTCC    200

BSNT_03535___    201 TGAGACGAAAGGCGCTAAAGGAATCATCGAATCTCCGCTTTTTGAGGTTC    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||.|
BSU23770___ds    201 TGAGACGAAAGGCGCTAAAGGAATCATCGAGTCTCCGCTTTTTGAGGTGC    250

BSNT_03535___    251 AGCATATGAAGGAAAAGCTGGAAGCGGCATATCAGCAGCCATTTCCGGGA    300
                     ||||||||||||.|||||||||||||||||||||||||||||||||.|||
BSU23770___ds    251 AGCATATGAAGGGAAAGCTGGAAGCGGCATATCAGCAGCCATTTCCCGGA    300

BSNT_03535___    301 AGATGGCTTTTAAAGTGCGACCATGAGCTTCCGATTTCAGGATCGATTAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds    301 AGATGGCTTTTAAAGTGCGACCATGAGCTTCCGATTTCAGGATCGATTAA    350

BSNT_03535___    351 AGCGAGGGGCGGGATTTATGAAGTGTTAAAGCATGCTGAAAATCTCGCGC    400
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU23770___ds    351 AGCGAGGGGCGGGATTTATGAAGTGTTAAAGTATGCTGAAAATCTCGCGC    400

BSNT_03535___    401 TTCAAGAAGGAATGCTTCGGGAAACCGATGATTACCGCATCTTACAGGAA    450
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU23770___ds    401 TTCAAGAAGGAATGCTTCAGGAAACCGATGATTACCGCATCTTACAGGAA    450

BSNT_03535___    451 GAGCGGTTTACCGGGTTTTTCTCCCGCTATTCGATTGCTGTCGGTTCGAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds    451 GAGCGGTTTACCGGGTTTTTCTCCCGCTATTCGATTGCTGTCGGTTCGAC    500

BSNT_03535___    501 AGGAAATCTGGGTTTAAGCATCGGCATCATCGGCGCGGCACTCGGCTTTC    550
                     |||||||||.|||||||||||||||||||||||||||||||||||.||||
BSU23770___ds    501 AGGAAATCTAGGTTTAAGCATCGGCATCATCGGCGCGGCACTCGGGTTTC    550

BSNT_03535___    551 GCGTGACAGTGCATATGTCCGCCGATGCTAAGCAGTGGAAAAAGGATCTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds    551 GCGTGACAGTGCATATGTCCGCCGATGCTAAGCAGTGGAAAAAGGATCTC    600

BSNT_03535___    601 CTCCGCCAAAAGGGAGTCACTGTTATGGAGTACGAAACAGATTACAGCGA    650
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU23770___ds    601 CTCCGCCAAAAGGGAGTCACTGTTATGGAGTACGAAACAGATTACAGTGA    650

BSNT_03535___    651 AGCGGTGAACGAGGGGAGACGGCAGGCGGAACAAGATCCATTCTGTTATT    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU23770___ds    651 AGCGGTGAACGAAGGGAGACGGCAGGCGGAACAAGATCCATTCTGTTATT    700

BSNT_03535___    701 TTATTGATGATGAACATTCTCGTCAGCTGTTCTTAGGATATGCTGTTGCC    750
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU23770___ds    701 TTATTGATGATGAACATTCTCGTCAGCTGTTCTTAGGATATGCTGTTGCT    750

BSNT_03535___    751 GCAAGCCGATTAAAAACACAGCTTGACTGTATGAATATACAGCCAAGTCT    800
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU23770___ds    751 GCAAGCCGATTAAAAACACAGCTTGACTGTATGAATATAAAGCCAAGTCT    800

BSNT_03535___    801 TGAGACGCCCTTGTTTGTGTATCTGCCGTGCGGAGTCGGCGGAGGACCGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds    801 TGAGACGCCCTTGTTTGTGTATCTGCCGTGCGGAGTCGGCGGAGGACCGG    850

BSNT_03535___    851 GCGGTGTAGCATTTGGGCTGAAGCTTCTATACGGAGATGATGTTCATGTG    900
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU23770___ds    851 GCGGTGTAGCATTTGGGCTGAAGCTTTTATACGGAGATGATGTTCATGTG    900

BSNT_03535___    901 TTTTTCGCAGAACCAACTCATTCACCTTGTATGCTGTTAGGGCTTTATTC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds    901 TTTTTCGCAGAACCAACTCATTCACCTTGTATGCTGTTAGGGCTTTATTC    950

BSNT_03535___    951 AGGACTTCACGAGAAGATCTCCGTCCAGGATATCGGCCTGGATAATCAGA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds    951 AGGACTTCACGAGAAGATCTCCGTCCAGGATATCGGCCTGGATAATCAGA   1000

BSNT_03535___   1001 CTGCTGCTGACGGACTTGCCGTAGGGAGGCCGTCAGGATTTGTCGGCAAG   1050
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds   1001 CGGCTGCTGACGGACTTGCCGTAGGGAGGCCGTCAGGATTTGTCGGCAAG   1050

BSNT_03535___   1051 CTGATTGAACCGCTTCTGAGCGGCTGTTATACGGTAGAGGACAATACGCT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds   1051 CTGATTGAACCGCTTCTGAGCGGCTGTTATACGGTAGAGGACAATACGCT   1100

BSNT_03535___   1101 TTATACTTTGCTTCATATGCTGGCTGTATCTGAAGATAAATATTTAGAGC   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds   1101 TTATACTTTGCTTCATATGCTGGCTGTATCTGAAGATAAATATTTAGAGC   1150

BSNT_03535___   1151 CCTCTGCTCTTGCCGGCATGTTCGGGCCGGTTCAGCTTTTTTCGACAGAA   1200
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU23770___ds   1151 CCTCTGCTCTTGCTGGCATGTTCGGGCCGGTTCAGCTTTTTTCGACAGAA   1200

BSNT_03535___   1201 GAGGGAAGGCGCTATGGTCAGAAATATAAGATGGAACATGCCGTACATGT   1250
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU23770___ds   1201 GAGGGAAGGCGCTATGCTCAGAAATATAAGATGGAACATGCCGTACATGT   1250

BSNT_03535___   1251 CGTCTGGGGAACGGGAGGAAGCATGGTTCCAAAAGATGAAATGGCTGCGT   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23770___ds   1251 CGTCTGGGGAACGGGAGGAAGCATGGTTCCAAAAGATGAAATGGCTGCGT   1300

BSNT_03535___   1301 ATAACCGAATTGGTGCTGATTTGCTAAAAAAACGAAATGAAAAATAA   1347
                     ||||||||||.||||||||||||||||||||||||||||||||||||
BSU23770___ds   1301 ATAACCGAATCGGTGCTGATTTGCTAAAAAAACGAAATGAAAAATAA   1347


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