Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03541 and BSU23820

See Amino acid alignment / Visit BSNT_03541 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence dna-align/BSNT_03541___namA.1.22522.seq
#    -bsequence dna-align/BSU23820___yqjM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03541___namA-BSU23820___yqjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03541___namA-BSU23820___yqjM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03541___namA
# 2: BSU23820___yqjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1017
# Identity:    1010/1017 (99.3%)
# Similarity:  1010/1017 (99.3%)
# Gaps:           0/1017 ( 0.0%)
# Score: 5022.0
# 
#
#=======================================

BSNT_03541___      1 ATGGCCAGAAAATTATTTACACCTATTACAATTAAAGATATGACGTTAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq      1 ATGGCCAGAAAATTATTTACACCTATTACAATTAAAGATATGACGTTAAA     50

BSNT_03541___     51 AAACCGCATTGTCATGTCGCCAATGTGCATGTATTCTTCTCATGAAAAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq     51 AAACCGCATTGTCATGTCGCCAATGTGCATGTATTCTTCTCATGAAAAGG    100

BSNT_03541___    101 ACGGAAAATTAACACCGTTCCACATGGCACATTACATATCGCGCGCAATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    101 ACGGAAAATTAACACCGTTCCACATGGCACATTACATATCGCGCGCAATC    150

BSNT_03541___    151 GGCCAGGTCGGACTGATTATTGTAGAGGCGTCAGCGGTTAACCCTCAAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    151 GGCCAGGTCGGACTGATTATTGTAGAGGCGTCAGCGGTTAACCCTCAAGG    200

BSNT_03541___    201 ACGAATCACTGACCAAGACTTAGGCATTTGGAGCGACGAGCATATTGAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    201 ACGAATCACTGACCAAGACTTAGGCATTTGGAGCGACGAGCATATTGAAG    250

BSNT_03541___    251 GCTTTGCAAAACTGACTGAGCAGGTCAAAGAACAAGGTTCAAAAATCGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    251 GCTTTGCAAAACTGACTGAGCAGGTCAAAGAACAAGGTTCAAAAATCGGC    300

BSNT_03541___    301 ATTCAGCTTGCCCATGCCGGACGTAAAGCTGAGCTTGAAGGAGATATCTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    301 ATTCAGCTTGCCCATGCCGGACGTAAAGCTGAGCTTGAAGGAGATATCTT    350

BSNT_03541___    351 CGCTCCATCGGCGATTGCGTTTGACGAACAATCAGCAACACCTGTAGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    351 CGCTCCATCGGCGATTGCGTTTGACGAACAATCAGCAACACCTGTAGAAA    400

BSNT_03541___    401 TGTCAGCAGAAAAAGTAAAAGAAACAGTTCAGGAGTTCAAGCAAGCGGCT    450
                     |||||||||||||||||||||||||.||.|||||||||||||||||||||
BSU23820___yq    401 TGTCAGCAGAAAAAGTAAAAGAAACGGTCCAGGAGTTCAAGCAAGCGGCT    450

BSNT_03541___    451 GCCCGCGCAAAAGAAGCCGGCTTTGATGTGATTGAAATTCATGCGGCGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    451 GCCCGCGCAAAAGAAGCCGGCTTTGATGTGATTGAAATTCATGCGGCGCA    500

BSNT_03541___    501 CGGATATTTAATTCATGAATTTTTGTCTCCGCTTTCCAACCATCGCACAG    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU23820___yq    501 CGGATATTTAATTCATGAATTTTTGTCTCCGCTTTCCAACCATCGAACAG    550

BSNT_03541___    551 ATGAATACGGCGGCTCACCTGAAAACCGCTATCGTTTCTTGAGAGAGATC    600
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    551 ATGAATATGGCGGCTCACCTGAAAACCGCTATCGTTTCTTGAGAGAGATC    600

BSNT_03541___    601 ATTGATGAAGTCAAACAAGTATGGGACGGTCCTTTATTTGTCCGTGTATC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    601 ATTGATGAAGTCAAACAAGTATGGGACGGTCCTTTATTTGTCCGTGTATC    650

BSNT_03541___    651 TGCTTCTGACTACACTGACAAAGGCTTAGACATTGCCGATCACATCGGTT    700
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU23820___yq    651 TGCTTCTGACTACACTGATAAAGGCTTAGACATTGCCGATCACATCGGTT    700

BSNT_03541___    701 TTGCAAAATGGATGAAGGAGCAGGGAGTTGACTTAATTGACTGCAGCTCA    750
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU23820___yq    701 TTGCAAAATGGATGAAGGAGCAGGGTGTTGACTTAATTGACTGCAGCTCA    750

BSNT_03541___    751 GGCGCCCTTGTTCACGCAGACATTAACGTATTCCCTGGCTATCAGGTCAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    751 GGCGCCCTTGTTCACGCAGACATTAACGTATTCCCTGGCTATCAGGTCAG    800

BSNT_03541___    801 CTTCGCTGAGAAAATCCGTGAACAGGCGGACATGGCTACTGGTGCCGTCG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    801 CTTCGCTGAGAAAATCCGTGAACAGGCGGACATGGCTACTGGTGCCGTCG    850

BSNT_03541___    851 GCATGATTACAGACGGTTCAATGGCTGAAGAAATTCTGCAAAACGGACGT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    851 GCATGATTACAGACGGTTCAATGGCTGAAGAAATTCTGCAAAACGGACGT    900

BSNT_03541___    901 GCCGACCTCATCTTTATCGGCAGAGAGCTTTTGCGGGATCCATTCTTTGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU23820___yq    901 GCCGACCTCATCTTTATCGGCAGAGAGCTTTTGCGGGATCCATTTTTTGC    950

BSNT_03541___    951 AAGAACTGCTGCGAAACAGCTCAATACAGAGATTCCGGCCCCTGTTCAAT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23820___yq    951 AAGAACTGCTGCGAAACAGCTCAATACAGAGATTCCGGCCCCTGTTCAAT   1000

BSNT_03541___   1001 ACGAAAGAGGCTGGTAA   1017
                     |||||||||||||||||
BSU23820___yq   1001 ACGAAAGAGGCTGGTAA   1017


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03541 and BSU23820

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
