Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03552 and BSU23880

See Amino acid alignment / Visit BSNT_03552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence dna-align/BSNT_03552___yqzJ.1.22522.seq
#    -bsequence dna-align/BSU23880___yqzJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03552___yqzJ-BSU23880___yqzJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03552___yqzJ-BSU23880___yqzJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03552___yqzJ
# 2: BSU23880___yqzJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     286/297 (96.3%)
# Similarity:   286/297 (96.3%)
# Gaps:           9/297 ( 3.0%)
# Score: 1422.0
# 
#
#=======================================

BSNT_03552___      1 ATGGATGTGATGACAATGTTTGTGGAATCGATAAATGACGTTTTATTCTT     50
                              |||||||||||||||||||||||||||||||||||||||||
BSU23880___yq      1 ---------ATGACAATGTTTGTGGAATCGATAAATGACGTTTTATTCTT     41

BSNT_03552___     51 AGTCGATTTTTTCACAATTATTCTTCCTGCTCTAACGGCAATCGGGATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23880___yq     42 AGTCGATTTTTTCACAATTATTCTTCCTGCTCTAACGGCAATCGGGATTG     91

BSNT_03552___    101 CATTTCTCTTACGGGAGTGCCGTGTGGGCGAGCAATGGAAATCAAAACGA    150
                     ||||.|||||||||||||||||||.|||||||||||||||||||||||||
BSU23880___yq     92 CATTCCTCTTACGGGAGTGCCGTGCGGGCGAGCAATGGAAATCAAAACGA    141

BSNT_03552___    151 ACAGATGAACATCAGACGGTCTTTCACATTAACCGAACAGACTTTCTTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23880___yq    142 ACAGATGAACATCAGACGGTCTTTCACATTAACCGAACAGACTTTCTTAT    191

BSNT_03552___    201 TATTATATATCATCGCATTACAACTTGGATACGTAAAGTCTTCCGCATGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23880___yq    192 TATTATATATCATCGCATTACAACTTGGATACGTAAAGTCTTCCGCATGA    241

BSNT_03552___    251 ATTCGCCTGTGAACGATGAGGAAGACGCCGGTTCTCTTCTTTTATAA    297
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU23880___yq    242 ATTCGCCTGTGAACGATGAGGAAGACGCCGGTTCTCTTCTTTTATAA    288


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.