Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03557 and BSU23910

See Amino acid alignment / Visit BSNT_03557 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_03557___yqjE.1.22522.seq
#    -bsequence dna-align/BSU23910___yqjE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03557___yqjE-BSU23910___yqjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03557___yqjE-BSU23910___yqjE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03557___yqjE
# 2: BSU23910___yqjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity:    1107/1116 (99.2%)
# Similarity:  1107/1116 (99.2%)
# Gaps:           0/1116 ( 0.0%)
# Score: 5499.0
# 
#
#=======================================

BSNT_03557___      1 ATGGTGAATGAAAAACGCCTGCTGGAAGAATTTTTAGAGCTTGTCCAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq      1 ATGGTGAATGAAAAACGCCTGCTGGAAGAATTTTTAGAGCTTGTCCAAAT     50

BSNT_03557___     51 TGACTCAGAAACAAAGCACGAAGCTGAAATCTGCAAAGTGCTGAAACGAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq     51 TGACTCAGAAACAAAGCACGAAGCTGAAATCTGCAAAGTGCTGAAACGAA    100

BSNT_03557___    101 AATTTTCTGATTTAGGTGTGGACGTTAAAGAAGACAATACAATGGATATC    150
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU23910___yq    101 AATTTTCTGATTTAGGTGTGGACGTTAAAGAAGACGATACAATGGATATC    150

BSNT_03557___    151 ACGGGCCACGGAGCCGGTAACCTGATTTGCACGCTAAAAGGGACAAAACA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    151 ACGGGCCACGGAGCCGGTAACCTGATTTGCACGCTAAAAGGGACAAAACA    200

BSNT_03557___    201 AACAGATACGATCTATTTTACATCTCATATGGACACAGTTGTACCCGGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    201 AACAGATACGATCTATTTTACATCTCATATGGACACAGTTGTACCCGGAA    250

BSNT_03557___    251 ACGGCGTAAAACCAGTTGTAGAGAACGGTTACGTCAAAACTGACGGCACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    251 ACGGCGTAAAACCAGTTGTAGAGAACGGTTACGTCAAAACTGACGGCACG    300

BSNT_03557___    301 ACGATTTTAGGCGCTGATGATAAAGCGGGATTGGCTGCAATGTTTGAGGC    350
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU23910___yq    301 ACGATTTTAGGTGCTGATGATAAAGCGGGATTGGCTGCAATGTTTGAGGC    350

BSNT_03557___    351 GATTAAGGTGCTGAAAGAAGAAAACATTGAACACGGCACGATTGAATTCA    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU23910___yq    351 GATTAAGGTGCTGAAAGAAGAAAATATTGAACACGGCACGATTGAATTCA    400

BSNT_03557___    401 TCATCACAGTAGGGGAAGAATCGGGTCTGATCGGAGCGAAGGCTCTTGAC    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU23910___yq    401 TCATCACAGTAGGGGAAGAATCGGGTCTGATCGGAGCGAAGGCGCTTGAC    450

BSNT_03557___    451 CGTTCTATGATCACTGCATCCTACGGCTATGCTCTTGATTCAGACGGAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    451 CGTTCTATGATCACTGCATCCTACGGCTATGCTCTTGATTCAGACGGAAA    500

BSNT_03557___    501 AGTCGGAAATATTATTGTGGCCGCGCCGACACAGGCGAAGGTAAGAGCGG    550
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU23910___yq    501 AGTCGGAAATATCATTGTGGCCGCGCCGACACAGGCGAAGGTAAGAGCGG    550

BSNT_03557___    551 CAATTTTCGGGAAAACCGCGCACGCCGGGGTTGAACCTGAAAAAGGGATT    600
                     |||||||||||||||||||.||||||||||||||||||||||||||.|||
BSU23910___yq    551 CAATTTTCGGGAAAACCGCTCACGCCGGGGTTGAACCTGAAAAAGGCATT    600

BSNT_03557___    601 TCAGCGATTACAATCGCTAGCAAAGCCATCTCAAAAATGCCATTGGGCCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    601 TCAGCGATTACAATCGCTAGCAAAGCCATCTCAAAAATGCCATTGGGCCG    650

BSNT_03557___    651 TATCGATGAAGAAACAACAGCTAATATCGGCCGGTTTGAAGGCGGCACAC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    651 TATCGATGAAGAAACAACAGCTAATATCGGCCGGTTTGAAGGCGGCACAC    700

BSNT_03557___    701 AAACAAACATTGTGTGCGATGAAGTTCATATTCTTGCTGAAGCGCGCTCT    750
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU23910___yq    701 AAACAAACATTGTGTGCGACGAAGTTCATATTCTTGCTGAAGCGCGCTCT    750

BSNT_03557___    751 TTAGTTCCTGAGAAAATGGAAGCTCAGGTTCAAAAAATGAAAGCTGCTTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    751 TTAGTTCCTGAGAAAATGGAAGCTCAGGTTCAAAAAATGAAAGCTGCTTT    800

BSNT_03557___    801 TGAAGAGGCAGCTGCTGATATGGGCGGACGCGCAGAAGTCGAAATTGAGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    801 TGAAGAGGCAGCTGCTGATATGGGCGGACGCGCAGAAGTCGAAATTGAGG    850

BSNT_03557___    851 TTATGTATCCGGGCTTTAAATATCAAGACGGCGACCAAGTTGTTGAAATC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    851 TTATGTATCCGGGCTTTAAATATCAAGACGGCGACCAAGTTGTTGAAATC    900

BSNT_03557___    901 GCGAAAAAAGCGGCTGCTAAAATCGGACGTCCAAGCGAGCTGCAAACGAG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq    901 GCGAAAAAAGCGGCTGCTAAAATCGGACGTCCAAGCGAGCTGCAAACGAG    950

BSNT_03557___    951 CGGCGGCGGAAGCGATGCGAACGTAATCGCTGGTCATGGCATCCCGACGG   1000
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU23910___yq    951 CGGCGGCGGAAGCGACGCGAACGTAATCGCTGGTCATGGCATCCCGACGG   1000

BSNT_03557___   1001 TCAATCTTGCTGTCGGTTATGAGCAAATCCATACAAAAAATGAAAAAATG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq   1001 TCAATCTTGCTGTCGGTTATGAGCAAATCCATACAAAAAATGAAAAAATG   1050

BSNT_03557___   1051 CCGATCGAAGAGCTCGTTAAAACGGCAGAAATGGTTGTTGCCATTATTGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23910___yq   1051 CCGATCGAAGAGCTCGTTAAAACGGCAGAAATGGTTGTTGCCATTATTGA   1100

BSNT_03557___   1101 AGAGGCGGCAAAATAA   1116
                     ||||||||||||||||
BSU23910___yq   1101 AGAGGCGGCAAAATAA   1116


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