Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03558 and BSU23920

See Amino acid alignment / Visit BSNT_03558 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_03558.1.22522.seq
#    -bsequence dna-align/BSU23920___yqjD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03558-BSU23920___yqjD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03558-BSU23920___yqjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03558
# 2: BSU23920___yqjD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1524
# Identity:    1112/1524 (73.0%)
# Similarity:  1112/1524 (73.0%)
# Gaps:         399/1524 (26.2%)
# Score: 5508.0
# 
#
#=======================================

BSNT_03558         0 --------------------------------------------------      0
                                                                       
BSU23920___yq      1 ATGAATGAGCACATGGATCATTTTTACACGAAACGCAAGCAGGCAGAAGA     50

BSNT_03558         0 --------------------------------------------------      0
                                                                       
BSU23920___yq     51 AGGCGGAGGACGGGAAAAGCTGGCTCAGCAGCGGCAAAAGGGCAAGCTCA    100

BSNT_03558         0 --------------------------------------------------      0
                                                                       
BSU23920___yq    101 CTGCTCGGGAAAGGATCATATTTCTTCTAGATCAGGACAGCTTTATCGAA    150

BSNT_03558         0 --------------------------------------------------      0
                                                                       
BSU23920___yq    151 TTACACCCCTTCATGGAAAGTCAAGTGTTAACAAGAGAACAGCGCATGTT    200

BSNT_03558         0 --------------------------------------------------      0
                                                                       
BSU23920___yq    201 AGGGGATGGGGTCGTGACAGGGTACGGCACAATTGACGGTCGCTCAGTTT    250

BSNT_03558         0 --------------------------------------------------      0
                                                                       
BSU23920___yq    251 ATGTATTTGCGCAAGACTTCACAGTGTACGGAGGGGCGCTTGGCGAAACC    300

BSNT_03558         0 --------------------------------------------------      0
                                                                       
BSU23920___yq    301 CATGCCAGGAAAATCTGCGCTTTGATGGATCTGGCAGCAAAAAATAAGGC    350

BSNT_03558         1 -------------------------------------------------G      1
                                                                      |
BSU23920___yq    351 GCCGATTATCGGGCTGAATGACTCAGGTGGTGCGAGAATTCAAGAGGGTG    400

BSNT_03558         2 TGGTATCATTAGATGGATACGGTCACATATTTTACCGAAACGTCTTATAT     51
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    401 TGTTATCATTAGATGGATACGGTCACATATTTTACCGAAACGTCTTATAT    450

BSNT_03558        52 TCCGGAGTCATTCCGCAAATATCGGTTATTTTAGGGCCGTGCGCTGGAGG    101
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    451 TCCGGAGTCATTCCGCAAATATCGGTTATTTTAGGGCCGTGCGCTGGAGG    500

BSNT_03558       102 CGCTGTATATTCTCCGGCACTCACAGATTTTATATTTATGGCTGAACAGA    151
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    501 CGCTGTATATTCTCCGGCACTCACAGATTTTATATTTATGGCTGAACAGA    550

BSNT_03558       152 CCGGCCGGATGTTTATTACCGGCCCGAAGGTGATTGAAAAAGTGACAGGG    201
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    551 CTGGCCGGATGTTTATTACCGGCCCGAAGGTGATTGAAAAAGTGACAGGG    600

BSNT_03558       202 GAACAGGTTGATGCGGAGAGCTTAGGCGGAGCGGGGATACATAATGCCGT    251
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    601 GAACAGGTTGATGCGGAGAGCTTAGGCGGAGCGGGGATACATAATGCCGT    650

BSNT_03558       252 CAGCGGAAACGCGCACTTTTCCGGACATACGGAGAAGGAGGTTCTGACAG    301
                     ||||||||||||.|||||||||||.|||||||||||||||||||||||||
BSU23920___yq    651 CAGCGGAAACGCCCACTTTTCCGGGCATACGGAGAAGGAGGTTCTGACAG    700

BSNT_03558       302 GGGTGAGAAAACTGCTGTCTTATTTGCCGCTGAATGGCCGGACAACAGAG    351
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU23920___yq    701 GGGTGAGAAAACTACTGTCTTATTTGCCGCTGAATGGCCGGACAACAGAG    750

BSNT_03558       352 CCGAAGCCAGAGAAAGAGGCGTCCAGACCGTTATTAAACCGTCTTGTCCC    401
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    751 CCGAAGCCAGAGAAAGAGGCGTCCAGACCGTTATTAAACCGTCTTGTCCC    800

BSNT_03558       402 TGCTGATACGACAAAGCCTTATGATGTTCGGAAGGTGATCAGGGAGCTGG    451
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU23920___yq    801 TGCTGATACGACAAAGCCTTATGATGTTCGGAAGGTGATTAGGGAGCTGG    850

BSNT_03558       452 CCGACCCGCAGACTTTTTTTGAGCTTCAGCCATTTTTTGCGAAGAACATT    501
                     |.|||||||||.|||||||||||.||||||||||||||||||||||||||
BSU23920___yq    851 CTGACCCGCAGTCTTTTTTTGAGATTCAGCCATTTTTTGCGAAGAACATT    900

BSNT_03558       502 GTCATTGGGTTTGCAAGGCTGGGTGAAAAAGCAATCGGCATCGTGGCGAG    551
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    901 GTCATTGGGTTTGCAAGGCTGGGTGAAAAAGCAATCGGCATCGTGGCGAG    950

BSNT_03558       552 CCAGCCGAAGCATCTGGCGGGAAGCCTGACGATTGACGCTGCTGATAAAG    601
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq    951 CCAGCCGAAGCATCTGGCGGGAAGCCTGACGATTGACGCTGCTGATAAAG   1000

BSNT_03558       602 CAGCAAGGTTCATCCGTTTTTGTGACGCATTTGATATCCCGTTGTTGACT    651
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU23920___yq   1001 CAGCAAGGTTCATCCGTTTTTGTGACGCATTTGATATCCCGCTGTTGACT   1050

BSNT_03558       652 GTCGAAGATGTCCCGGGGTTTCTGCCGGGTATTCAGCAAGAGCACAACGG    701
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq   1051 GTCGAAGATGTCCCGGGGTTTCTGCCGGGTATTCAGCAAGAGCACAACGG   1100

BSNT_03558       702 AATCATCAGGCATGGAGCAAAATTATTGTTTGCTTATGCTGAAGCGACTG    751
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq   1101 AATCATCAGGCATGGAGCAAAATTATTGTTTGCTTATGCTGAAGCGACTG   1150

BSNT_03558       752 TCCCAAAAGTCACACTCATCATTAGAAAAGCGTACGGCGGCGCCTATGTG    801
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq   1151 TCCCAAAAGTCACACTCATCATTAGAAAAGCGTACGGCGGCGCCTATGTG   1200

BSNT_03558       802 GCCATGAACAGCAAAGCGATCGGAGCGGACCTTGTGTTTGCATGGCCGAA    851
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq   1201 GCCATGAACAGCAAAGCGATCGGAGCGGACCTTGTGTTTGCATGGCCGAA   1250

BSNT_03558       852 TGCTGAAATCGCAGTGATGGGTCCAGAAGGTGCGGCATCGATTTTGTATG    901
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq   1251 TGCTGAAATCGCAGTGATGGGTCCAGAAGGTGCGGCATCGATTTTGTATG   1300

BSNT_03558       902 AAAAGGAAATCAAAGCTTCAGCTGACCCGCAAAAGACGAAACGCGAAAAA    951
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq   1301 AAAAGGAAATCAAAGCTTCAGCTGACCCGCAAAAGACGAAACGCGAAAAA   1350

BSNT_03558       952 ACAGCTGAATACAAAAAGCAAAACGCCGGCCCATACAAAGCGGCCGCTTG   1001
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq   1351 ACTGCTGAATACAAAAAGCAAAACGCCGGCCCATACAAAGCGGCCGCTTG   1400

BSNT_03558      1002 TGGAATGGTCGATGACATCATTTTGCCGGAAGAATCAAGGGGAAAACTGA   1051
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU23920___yq   1401 TGGAATGGTCGATGACATCATTTTGCCGGAAGAATCAAGGGGAAGACTGA   1450

BSNT_03558      1052 TTCAAGCTTTTCATATGCTTGCACATAAGACAGAAGAGAGACCGAAAAAA   1101
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU23920___yq   1451 TTCAAGCTTTTCATATGCTTACACATAAGACAGAAGAGAGACCGAAAAAA   1500

BSNT_03558      1102 AAGCACGGTAACATACCGCTTTAA   1125
                     ||||||||||||||||||||||||
BSU23920___yq   1501 AAGCACGGTAACATACCGCTTTAA   1524


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