Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03564 and BSU23950
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence dna-align/BSNT_03564___yqjA.1.22522.seq
# -bsequence dna-align/BSU23950___yqjA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03564___yqjA-BSU23950___yqjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03564___yqjA-BSU23950___yqjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03564___yqjA
# 2: BSU23950___yqjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity: 955/969 (98.6%)
# Similarity: 955/969 (98.6%)
# Gaps: 0/969 ( 0.0%)
# Score: 4719.0
#
#
#=======================================
BSNT_03564___ 1 ATGTTTAAAATTGGTTATCGCACAATAAAGACCGCGCTAGGAACAGCTTT 50
|||||||||||||||||.||||||||||||||||||||.|||||||||||
BSU23950___yq 1 ATGTTTAAAATTGGTTACCGCACAATAAAGACCGCGCTTGGAACAGCTTT 50
BSNT_03564___ 51 GGCTATTTATATAAGCCAGTTATTGCATTTGCAAAACTTCGCATCAGCAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 51 GGCTATTTATATAAGCCAGTTATTGCATTTGCAAAACTTCGCATCAGCAG 100
BSNT_03564___ 101 GAATCATCACCATTTTGTGCATACAAATCACACAAAAACGGTCGCTTCAG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 101 GAATCATCACCATTTTGTGCATACAAATCACACAAAAACGGTCGCTTCAG 150
BSNT_03564___ 151 GCCTCATGGGCCCGCTTTGCGGCATGTTGTCTGGCAATTGTTTTTTCTTA 200
||||||||||||||||||.|||||||.|||||||||||||.|||||||||
BSU23950___yq 151 GCCTCATGGGCCCGCTTTTCGGCATGCTGTCTGGCAATTGCTTTTTCTTA 200
BSNT_03564___ 201 TCTCTTTTTCGAGCTTATTGGCTACCACCCGTTTGTTATCGGAGCGCTTC 250
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU23950___yq 201 TCTCTTTTTCGAGCTTATTGGCTACCACCCGTTTGTGATCGGAGCGCTTC 250
BSNT_03564___ 251 TTTTGATATTCATTCCGATAACGGTTCTGTTAAAAATTAACGAAGGTATC 300
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU23950___yq 251 TTTTGATATTCATTCCGATAACGGTTCTGTTAAAAATTAACGAGGGTATC 300
BSNT_03564___ 301 GTCACCAGTTCCGTTATTATCCTTCATTTATACATGTCCGGCGGCATTAC 350
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU23950___yq 301 GTCACCAGTTCTGTTATTATCCTTCATTTATACATGTCCGGCGGCATTAC 350
BSNT_03564___ 351 GCTTGCTTTCATCTGGAATGAAGTTCAGCTGATTACGGTTGGCATCGGCG 400
||.|.|||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 351 GCCTACTTTCATCTGGAATGAAGTTCAGCTGATTACGGTTGGCATCGGCG 400
BSNT_03564___ 401 TCGCTCTATTGATGAACTTGTATATGCCTAGTCTTGACCGGAAACTGATT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 401 TCGCTCTATTGATGAACTTGTATATGCCTAGTCTTGACCGGAAACTGATT 450
BSNT_03564___ 451 GCCTACCGCAAAAAGATAGAGGATAACTTTGCTGTCATTTTTGCAGAAAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 451 GCCTACCGCAAAAAGATAGAGGATAACTTTGCTGTCATTTTTGCAGAAAT 500
BSNT_03564___ 501 CGAACGGTATTTGTTAACTGGTGAGCAAGATTGGTCAGGAAAAGAAATTC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 501 CGAACGGTATTTGTTAACTGGTGAGCAAGATTGGTCAGGAAAAGAAATTC 550
BSNT_03564___ 551 CGGAAACGCACCAGCTCATTACGGAGGCTAAAAACCTGGCATATCGAGAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 551 CGGAAACGCACCAGCTCATTACGGAGGCTAAAAACCTGGCATATCGAGAT 600
BSNT_03564___ 601 GTGCAAAACCACATTTTGCGTTATGAAAATCTGCATTATCATTATTTTAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 601 GTGCAAAACCACATTTTGCGTTATGAAAATCTGCATTATCATTATTTTAA 650
BSNT_03564___ 651 AATGAGAGAAAAGCAATTTGAAATTATCGAACGCCTTCTCCCTAAAGTGA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 651 AATGAGAGAAAAGCAATTTGAAATTATCGAACGCCTTCTCCCTAAAGTGA 700
BSNT_03564___ 701 CATCGATCTCCATTACGGTAGATCAGGGAAAAATGATCGCTGAATTTATT 750
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU23950___yq 701 CATCGATCTCCATCACGGTAGATCAGGGAAAAATGATCGCTGAATTTATT 750
BSNT_03564___ 751 CATGATTTGCGGGAGGCGATACACCCTGGGAATACAGCGTACAAATTTCT 800
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU23950___yq 751 CATGATTTGCGGGAGGCGATACACCCTGGGAATACAGCATACAAATTTCT 800
BSNT_03564___ 801 GAAAAGACTTGCTGACATGAGAAAAGAATTTGAGGAGATGCCGCTTCCGG 850
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU23950___yq 801 GAAAAGACTTGCTGACATGAGAAAAGAATTTGAGGAGATGCCGCTTCCTG 850
BSNT_03564___ 851 CGACTAGAGAGGAATTTGAAGCAAGGGCCGCTCTCTTCCATCTTCTCGGC 900
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU23950___yq 851 CGACTAGAGAGGAATTTGAAGCGAGGGCCGCTCTCTTCCATCTTCTCGGC 900
BSNT_03564___ 901 GAAATGGAACAATATTTAGTGATTAAAAGTTATTTTAAAGGAATAAAAGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23950___yq 901 GAAATGGAACAATATTTAGTGATTAAAAGTTATTTTAAAGGAATAAAAGC 950
BSNT_03564___ 951 GCAAAAATCACTCGGATGA 969
|||||||||||||||||||
BSU23950___yq 951 GCAAAAATCACTCGGATGA 969
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