Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03572 and BSU23990

See Amino acid alignment / Visit BSNT_03572 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence dna-align/BSNT_03572___yqiW.1.22522.seq
#    -bsequence dna-align/BSU23990___yqiW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03572___yqiW-BSU23990___yqiW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03572___yqiW-BSU23990___yqiW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03572___yqiW
# 2: BSU23990___yqiW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity:     426/438 (97.3%)
# Similarity:   426/438 (97.3%)
# Gaps:           0/438 ( 0.0%)
# Score: 2082.0
# 
#
#=======================================

BSNT_03572___      1 TTGAATATGGACTTTAATTTATTTATGAATGATATTGTCCGCCAAGCGAG     50
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU23990___yq      1 TTGAACATGGACTTTAATTTATTTATGAATGATATTGTCCGCCAAGCGAG     50

BSNT_03572___     51 ACAGGAAATTACAGCTGCTGGATACACTGAGCTGAAAACAGCTGAAGAGG    100
                     |||.|||||.||||||||.||||||||.|||||.||||||||.|||||||
BSU23990___yq     51 ACAAGAAATAACAGCTGCCGGATACACCGAGCTTAAAACAGCCGAAGAGG    100

BSNT_03572___    101 TGGATGAGGCACTTACGAAAAAAGGAACGACGCTTGTCATGGTAAACTCT    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU23990___yq    101 TGGATGAGGCACTTACGAAAAAAGGAACGACGCTCGTCATGGTAAACTCT    150

BSNT_03572___    151 GTTTGCGGATGCGCCGGAGGAATTGCAAGACCGGCAGCCTACCATTCCGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23990___yq    151 GTTTGCGGATGCGCCGGAGGAATTGCAAGACCGGCAGCCTACCATTCCGT    200

BSNT_03572___    201 TCACTATGATAAAAGACCTGATCAGCTCGTCACCGTTTTTGCCGGACAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23990___yq    201 TCACTATGATAAAAGACCTGATCAGCTCGTCACCGTTTTTGCCGGACAGG    250

BSNT_03572___    251 ATAAAGAAGCGACAGCGCGTGCGCGAGACTATTTTGAAGGTTATCCGCCA    300
                     |||||||||||||||||||||||||.||||||||||||||||||||.|||
BSU23990___yq    251 ATAAAGAAGCGACAGCGCGTGCGCGTGACTATTTTGAAGGTTATCCACCA    300

BSNT_03572___    301 TCTTCTCCGTCCTTTGCGATTTTGAAAGACGGAAAGATCATGAAAATGGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23990___yq    301 TCTTCTCCGTCCTTTGCGATTTTGAAAGACGGAAAGATCATGAAAATGGT    350

BSNT_03572___    351 AGAGCGTCATGAAATTGAAGGCCACGAGCCGATGGCCGTAGTGGCAAAGC    400
                     ||||||||||||||||||||||||.|||||||||||.|||||||||||||
BSU23990___yq    351 AGAGCGTCATGAAATTGAAGGCCATGAGCCGATGGCTGTAGTGGCAAAGC    400

BSNT_03572___    401 TGCAGGAAGCCTTTGAAGAATATTGTGAAGAAGTATAA    438
                     ||||||||||||||||||||||||||||||||||||||
BSU23990___yq    401 TGCAGGAAGCCTTTGAAGAATATTGTGAAGAAGTATAA    438


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