Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03573 and BSU24000

See Amino acid alignment / Visit BSNT_03573 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence dna-align/BSNT_03573___bmrU.1.22522.seq
#    -bsequence dna-align/BSU24000___bmrU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03573___bmrU-BSU24000___bmrU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03573___bmrU-BSU24000___bmrU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03573___bmrU
# 2: BSU24000___bmrU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity:     875/894 (97.9%)
# Similarity:   875/894 (97.9%)
# Gaps:           0/894 ( 0.0%)
# Score: 4299.0
# 
#
#=======================================

BSNT_03573___      1 ATGAGCCACCGGAAAGCGTTACTGATTCATAACGGAAATGCCGGCAACAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm      1 ATGAGCCACCGGAAAGCGTTACTGATTCATAACGGAAATGCCGGCAACAA     50

BSNT_03573___     51 AAATATAGAAAAAGCACTTGGTGCTGTCGTGCCGGTTTTATCTCACCATT    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU24000___bm     51 AAATATAGAAAAAGCACTTGGTGCTGTGGTGCCGGTTTTATCTCACCATT    100

BSNT_03573___    101 TAGATGAGGTGATTATTAAACAGACAAAGAAAAAGGATGATGCGTATCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    101 TAGATGAGGTGATTATTAAACAGACAAAGAAAAAGGATGATGCGTATCAT    150

BSNT_03573___    151 TTTTGCCGATCCATTGATGATTCTGTCGACACCGTCTTCATTCTCGGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    151 TTTTGCCGATCCATTGATGATTCTGTCGACACCGTCTTCATTCTCGGCGG    200

BSNT_03573___    201 CGACGGCACGATCCATCAATGCATAAATGCTATCAGCGCTCTAGAAAGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    201 CGACGGCACGATCCATCAATGCATAAATGCTATCAGCGCTCTAGAAAGAA    250

BSNT_03573___    251 AACCCGCGGTCGGAATTTTGCCCGGAGGCACGTGCAATGACTTTTCAAGA    300
                     |||||||.|||||||||||||||||.|||||||||||.||||||||||||
BSU24000___bm    251 AACCCGCTGTCGGAATTTTGCCCGGCGGCACGTGCAACGACTTTTCAAGA    300

BSNT_03573___    301 GTGCTTGGCATCCCTCAAAATCTTGCAAAGGCCGCGGAAGCACTTATGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    301 GTGCTTGGCATCCCTCAAAATCTTGCAAAGGCCGCGGAAGCACTTATGGC    350

BSNT_03573___    351 AGGAAATAAAACCAGCGTAGACGTATGTCAGATGAATGACCGTTATTTTT    400
                     .|||||.|||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    351 GGGAAAAAAAACCAGCGTAGACGTATGTCAGATGAATGACCGTTATTTTT    400

BSNT_03573___    401 TAAATTTCTGGGGGATCGGCTTAATTGCAGAAACGTCGAATCAAATCAAC    450
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    401 TGAATTTCTGGGGGATCGGCTTAATTGCAGAAACGTCGAATCAAATCAAC    450

BSNT_03573___    451 GAAACGGAAAAAGCATTATTGGGAAAAATCAGCTATTTTACAAGTGCGTT    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU24000___bm    451 GAAACGGAAAAAGCATTATTGGGAAAAATCAGCTATTTTACAAGTGCCTT    500

BSNT_03573___    501 GCGAACCGTCTCATCCGCTGCATCGTTTCCGATGACATTAAAAATTGACG    550
                     |||||||||||||||.||||||||||||||||||||||||||||||||.|
BSU24000___bm    501 GCGAACCGTCTCATCTGCTGCATCGTTTCCGATGACATTAAAAATTGATG    550

BSNT_03573___    551 GAAAAGAAATTAAAGAAGAAGCCGTTATGCTGCTTGTGATGAATGGCCAA    600
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    551 GAGAAGAAATTAAAGAAGAAGCCGTTATGCTGCTTGTGATGAATGGCCAA    600

BSNT_03573___    601 TACATTGGAACGAATCGAATTCCTCTGCCCGATGCCAGTATTGAAGACGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    601 TACATTGGAACGAATCGAATTCCTCTGCCCGATGCCAGTATTGAAGACGG    650

BSNT_03573___    651 CTTACTTGATGTTCTCATATGCCGCAACACCAACCTCACCGCGCTGCGGG    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU24000___bm    651 CTTACTTGATGTTCTCATATGCCGCAATACCAACCTCACCGCGCTGCGGG    700

BSNT_03573___    701 AGCTGATGAGCATGGAACAGGGCTCAATTGATCGTTTTACCGGAGAGCTG    750
                     |||||||||||||||||||.||||||||||||||||||||.||||||.||
BSU24000___bm    701 AGCTGATGAGCATGGAACAAGGCTCAATTGATCGTTTTACTGGAGAGTTG    750

BSNT_03573___    751 TCCTATGTCCAGGCCTCCCGTATCGAAATTGAAACAGACACTGCCAAAAA    800
                     ||||||||||||||.|||||||||||.|||||||||||||||||||||||
BSU24000___bm    751 TCCTATGTCCAGGCTTCCCGTATCGAGATTGAAACAGACACTGCCAAAAA    800

BSNT_03573___    801 GGCGGATATGGATGGAGAAGTTTATACACATACACCCGCAGTCATTCAGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24000___bm    801 GGCGGATATGGATGGAGAAGTTTATACACATACACCCGCAGTCATTCAGG    850

BSNT_03573___    851 TCCTGCCGCAGCATATCGACATGCTTGTTCCCGCAAATGGATAA    894
                     |||||||.|||||||||||||||||||||||||||||||.||||
BSU24000___bm    851 TCCTGCCACAGCATATCGACATGCTTGTTCCCGCAAATGAATAA    894


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