Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03617 and BSU24260

See Amino acid alignment / Visit BSNT_03617 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence dna-align/BSNT_03617.1.22522.seq
#    -bsequence dna-align/BSU24260___yqxC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03617-BSU24260___yqxC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03617-BSU24260___yqxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03617
# 2: BSU24260___yqxC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity:     718/846 (84.9%)
# Similarity:   718/846 (84.9%)
# Gaps:         117/846 (13.8%)
# Score: 3546.0
# 
#
#=======================================

BSNT_03617         0 --------------------------------------------------      0
                                                                       
BSU24260___yq      1 ATGACGTCAAAGAAAGAACGATTAGATGTATTATTAGTGGAAAGAGGGCT     50

BSNT_03617         0 --------------------------------------------------      0
                                                                       
BSU24260___yq     51 GGCGGAAACGCGTGAAAAAGCCAAAAGAGCCATTATGGCGGGGATCGTCT    100

BSNT_03617         1 -----------------TTGGACAAGCCTGGAGAAAAAATTGACCGCGAC     33
                                      |||||||||||||||||||||||||||||||||
BSU24260___yq    101 ATTCAAACGAAAACCGCTTGGACAAGCCTGGAGAAAAAATTGACCGCGAC    150

BSNT_03617        34 CTTCCGTTAACCGTTAAAGGAAACCCGCTGAGGTATGTGAGCAGGGGCGG     83
                     |||||||||||.||.|||||||||||||||||||||||||||||||||||
BSU24260___yq    151 CTTCCGTTAACTGTCAAAGGAAACCCGCTGAGGTATGTGAGCAGGGGCGG    200

BSNT_03617        84 CTTAAAGCTCGAAAAAGCGTTGAAGGAATTTCCCGTCTCTGTCAAGGATA    133
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU24260___yq    201 CTTAAAGCTCGAAAAAGCGTTGAAGGAATTTCCCGTCTCTGTCAAAGATA    250

BSNT_03617       134 AAATTATGATTGATATTGGCTCCTCCACCGGCGGTTTTACGGACTGCGCT    183
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    251 AAATTATGATTGATATTGGCTCCTCCACCGGCGGTTTTACGGACTGCGCT    300

BSNT_03617       184 TTGCAAAATGGAGCTAAACAGTCATACGCTGTGGATGTAGGCTATAATCA    233
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    301 TTGCAAAATGGAGCTAAACAGTCATACGCTGTGGATGTAGGCTATAATCA    350

BSNT_03617       234 GCTTGCGTGGAAGCTCAGACAGGATGAACGGGTCGTCGTGATGGAACGGA    283
                     ||||||.||||||||.||||||||||||||||||||||||||||||||||
BSU24260___yq    351 GCTTGCATGGAAGCTTAGACAGGATGAACGGGTCGTCGTGATGGAACGGA    400

BSNT_03617       284 CGAACTTTCGTTATGCAACACCGGCAGACTTTACAAAGGGCATGCCGGAG    333
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    401 CGAACTTTCGTTATGCAACACCGGCAGACTTTACAAAGGGCATGCCGGAG    450

BSNT_03617       334 TTTGCCACAATTGATGTGTCCTTTATTTCACTGCGGCTCATCCTGCCTGT    383
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    451 TTTGCCACAATTGATGTGTCCTTTATTTCACTGCGGCTCATCCTGCCTGT    500

BSNT_03617       384 CCTAAGGACTTTGCTCGTACCGGGCAGCGACTGCATGGCTCTAGTTAAGC    433
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU24260___yq    501 CCTAAGGACTTTGCTCGTACCGGGCAGCGACTGCATGGCTTTAGTTAAGC    550

BSNT_03617       434 CTCAGTTTGAAGCGGGACGGGAATCCGTCGGCAAAAAAGGGATTGTCAGA    483
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU24260___yq    551 CTCAGTTTGAAGCGGGACGGGAATCCGTCGGCAAAAAAGGGATTGTTAGA    600

BSNT_03617       484 GATCCTAAAGTGCATGCTGATGTGCTCAAGCGAATGATCAGTTTTTCTGC    533
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    601 GATCCTAAAGTGCATGCTGATGTGCTCAAGCGAATGATCAGTTTTTCTGC    650

BSNT_03617       534 CGCTGAAGGCTATATATGTAAAGGCTTGTCATTTTCTCCAATCACTGGAG    583
                     |||||||||||||||.|||||||||||||||||||||||||||||.||||
BSU24260___yq    651 CGCTGAAGGCTATATCTGTAAAGGCTTGTCATTTTCTCCAATCACGGGAG    700

BSNT_03617       584 GAGACGGAAATATTGAGTTTCTCCTTCATTTGCATTGGCCGGGAGAGGGA    633
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    701 GAGACGGAAATATTGAGTTTCTCCTTCATTTGCATTGGCCGGGAGAGGGA    750

BSNT_03617       634 CAGGATGGCCAGGAGCTGCCGGAAGAAGAGATCATGCGCGTTGTAGAAGA    683
                     |||||.||||||||.|||||||||||||||||||||||||||||||||||
BSU24260___yq    751 CAGGAAGGCCAGGAACTGCCGGAAGAAGAGATCATGCGCGTTGTAGAAGA    800

BSNT_03617       684 AGCACATAAGACGTTAAAAGAAAAAAAAGCAGATGTACCGGAATAA    729
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU24260___yq    801 AGCACATAAGACGTTAAAAGAAAAAAAAGCAGATGTACCGGAATAA    846


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.