Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03651 and BSU24460

See Amino acid alignment / Visit BSNT_03651 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:35
# Commandline: needle
#    -asequence dna-align/BSNT_03651___yqhT.1.22522.seq
#    -bsequence dna-align/BSU24460___yqhT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03651___yqhT-BSU24460___yqhT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03651___yqhT-BSU24460___yqhT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03651___yqhT
# 2: BSU24460___yqhT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1062
# Identity:    1058/1062 (99.6%)
# Similarity:  1058/1062 (99.6%)
# Gaps:           0/1062 ( 0.0%)
# Score: 5274.0
# 
#
#=======================================

BSNT_03651___      1 ATGAAGCTAGAGAAATTAAGAAACCTGTTTGGACAGCTGGGAATTGACGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq      1 ATGAAGCTAGAGAAATTAAGAAACCTGTTTGGACAGCTGGGAATTGACGG     50

BSNT_03651___     51 CATGCTGGTTACAAGCAGCACGAATGTACGCTATATGACAGGGTTTACAG    100
                     |||||||.|||||||||.|||.||||||||||||||||||||||||||||
BSU24460___yq     51 CATGCTGATTACAAGCAACACTAATGTACGCTATATGACAGGGTTTACAG    100

BSNT_03651___    101 GTTCGGCGGGTTTGGCTGTTATATCGGGTGACAAAGCAGCGTTTATTACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    101 GTTCGGCGGGTTTGGCTGTTATATCGGGTGACAAAGCAGCGTTTATTACG    150

BSNT_03651___    151 GATTTTCGTTATACTGAGCAGGCGAAGGTTCAGGTAAAGGGTTTTGAGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    151 GATTTTCGTTATACTGAGCAGGCGAAGGTTCAGGTAAAGGGTTTTGAGAT    200

BSNT_03651___    201 CATTGAACATGGCGGCAGCTTGATTCAGACCACTGCCGACACTGTTGAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    201 CATTGAACATGGCGGCAGCTTGATTCAGACCACTGCCGACACTGTTGAAT    250

BSNT_03651___    251 CGTTTGGCATCAAGCGTCTCGGTTTTGAACAGAACAGCATGACATATGGC    300
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU24460___yq    251 CGTTTGGCATCAAGCGTCTCGGCTTTGAACAGAACAGCATGACATATGGC    300

BSNT_03651___    301 ACTTACGCTTCATACAGCGCCGTTATCAGTGATGCCGAATTAGTGCCTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    301 ACTTACGCTTCATACAGCGCCGTTATCAGTGATGCCGAATTAGTGCCTGT    350

BSNT_03651___    351 GGCTGAATCCGTGGAAAAGTTGCGCTTGATTAAGTCTAGTGAAGAGATTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    351 GGCTGAATCCGTGGAAAAGTTGCGCTTGATTAAGTCTAGTGAAGAGATTA    400

BSNT_03651___    401 AGATATTAGAGGAAGCTGCGAAGATTGCAGATGATGCCTTCAGACATATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    401 AGATATTAGAGGAAGCTGCGAAGATTGCAGATGATGCCTTCAGACATATC    450

BSNT_03651___    451 TTGACGTTTATGAAACCCGGCATTTCTGAAATCGCTGTTGCCAATGAGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    451 TTGACGTTTATGAAACCCGGCATTTCTGAAATCGCTGTTGCCAATGAGCT    500

BSNT_03651___    501 GGAGTTTTATATGAGAAGCCAGGGAGCAGACAGCTCTTCTTTTGATATGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    501 GGAGTTTTATATGAGAAGCCAGGGAGCAGACAGCTCTTCTTTTGATATGA    550

BSNT_03651___    551 TTGTCGCCTCAGGCCTTCGTTCAAGCCTTCCGCACGGTGTGGCCAGTGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    551 TTGTCGCCTCAGGCCTTCGTTCAAGCCTTCCGCACGGTGTGGCCAGTGAC    600

BSNT_03651___    601 AAACTGATTGAAAGCGGAGACCTTGTTACGCTTGATTTTGGCGCTTATTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    601 AAACTGATTGAAAGCGGAGACCTTGTTACGCTTGATTTTGGCGCTTATTA    650

BSNT_03651___    651 TAAAGGATATTGTTCTGATATTACCCGGACGGTCGCTGTAGGTCAGCCCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    651 TAAAGGATATTGTTCTGATATTACCCGGACGGTCGCTGTAGGTCAGCCCA    700

BSNT_03651___    701 GTGATCAATTGAAGGAGATCTATCAGGTTGTATTTGATGCTCAGGCGCTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    701 GTGATCAATTGAAGGAGATCTATCAGGTTGTATTTGATGCTCAGGCGCTT    750

BSNT_03651___    751 GGCGTCGCACATATTAAGCCGGGAATGACAGGAAAAGAGGCTGACGCCCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    751 GGCGTCGCACATATTAAGCCGGGAATGACAGGAAAAGAGGCTGACGCCCT    800

BSNT_03651___    801 CACAAGGGATCATATTGCTGCAAAAGGCTACGGTGACTATTTCGGCCATT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    801 CACAAGGGATCATATTGCTGCAAAAGGCTACGGTGACTATTTCGGCCATT    850

BSNT_03651___    851 CAACCGGGCACGGGCTCGGCATGGAAGTTCATGAATCGCCGGGATTATCC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    851 CAACCGGGCACGGGCTCGGCATGGAAGTTCATGAATCGCCGGGATTATCC    900

BSNT_03651___    901 GTCAGATCTTCAGCTATCCTTGAACCGGGTATGGTGGTCACAGTGGAGCC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    901 GTCAGATCTTCAGCTATCCTTGAACCGGGTATGGTGGTCACAGTGGAGCC    950

BSNT_03651___    951 GGGCATTTACATACCAGAAACAGGCGGTGTCCGCATTGAAGATGACATCG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq    951 GGGCATTTACATACCAGAAACAGGCGGTGTCCGCATTGAAGATGACATCG   1000

BSNT_03651___   1001 TGATTACAGAAAACGGCAACCGGACAATCACCCATTCCCCAAAAGAACTT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24460___yq   1001 TGATTACAGAAAACGGCAACCGGACAATCACCCATTCCCCAAAAGAACTT   1050

BSNT_03651___   1051 ATTATTTTGTGA   1062
                     ||||||||||||
BSU24460___yq   1051 ATTATTTTGTGA   1062


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