Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03546 and GA1

See Amino acid alignment / Visit BSNT_03546 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence dna-align/BSNT_03546___rpmGA1.1.22522.seq
#    -bsequence dna-align/BSU24900___rpmGA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03546___rpmGA1-BSU24900___rpmGA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03546___rpmGA1-BSU24900___rpmGA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03546___rpmGA1
# 2: BSU24900___rpmGA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:     114/151 (75.5%)
# Similarity:   114/151 (75.5%)
# Gaps:           2/151 ( 1.3%)
# Score: 410.0
# 
#
#=======================================

BSNT_03546___      1 ATGAGAGTAAATGTTACTTTAGCCTGCACTGAAACGGGAGACCGAAATTA     50
                     |||.|.||.|||.|||||||.||.|||||||||...||.||.||.||.||
BSU24900___rp      1 ATGCGCGTTAATATTACTTTGGCTTGCACTGAATGTGGTGAGCGTAACTA     50

BSNT_03546___     51 CATCACAACAAAAAATAAACGCACCAATCCAGACCGTTTGGAGCTGAAAA    100
                     .||..|.|.|||.||.|||||||.||||||||||||..|.||..|.||||
BSU24900___rp     51 TATTTCTAAAAAGAACAAACGCAACAATCCAGACCGCGTTGAATTTAAAA    100

BSNT_03546___    101 AATATTCACCGCGT-TTAAAGAAATATACCCTTCACCGTGAAACAAAATA    149
                     ||||||..||.||| .|||| ||||.|||..|.|||||||||||||||||
BSU24900___rp    101 AATATTGCCCACGTGATAAA-AAATCTACGTTACACCGTGAAACAAAATA    149

BSNT_03546___    150 A    150
                     |
BSU24900___rp    150 A    150


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