Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03730 and BSU24980

See Amino acid alignment / Visit BSNT_03730 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:43
# Commandline: needle
#    -asequence dna-align/BSNT_03730___pstC.1.22522.seq
#    -bsequence dna-align/BSU24980___pstC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03730___pstC-BSU24980___pstC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03730___pstC-BSU24980___pstC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03730___pstC
# 2: BSU24980___pstC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity:     917/930 (98.6%)
# Similarity:   917/930 (98.6%)
# Gaps:           0/930 ( 0.0%)
# Score: 4533.0
# 
#
#=======================================

BSNT_03730___      1 ATGATAAACAATAGAGAAAATATGTCTGTGAGCGAGCGTTTAATCAGCTC     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU24980___ps      1 ATGATAAACAATAGAGAAAATATGTCTGTGAGCGAGCGCTTAATCAGCTC     50

BSNT_03730___     51 AAGGCAAAATCGGCAATTGGATGAAGTTCGGGGAAGAATGATTGTGACAG    100
                     .|||||||||||||||||||||||||||||||||||||||||.||.||||
BSU24980___ps     51 TAGGCAAAATCGGCAATTGGATGAAGTTCGGGGAAGAATGATAGTCACAG    100

BSNT_03730___    101 CATGTGCGCTGATTATGATTGCGGCATCTGTTGCAATCACCATTTTCCTC    150
                     |.|||||.||||||||||||||||||||||||||.||.||||||||||||
BSU24980___ps    101 CTTGTGCACTGATTATGATTGCGGCATCTGTTGCGATTACCATTTTCCTC    150

BSNT_03730___    151 GGCGTGAAGGGGCTGCAATCTTTTCTTGTAAATGGTGTAAGCCCAATTGA    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    151 GGCGTTAAGGGGCTGCAATCTTTTCTTGTAAATGGTGTAAGCCCAATTGA    200

BSNT_03730___    201 ATTCTTAACGAGCTTAAATTGGAATCCTACAGATAGTGATCCGAAATACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    201 ATTCTTAACGAGCTTAAATTGGAATCCTACAGATAGTGATCCGAAATACG    250

BSNT_03730___    251 GAGTGCTGCCATTTATTTTTGGCTCATTTGCAGTAACGATTCTTTCTGCT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    251 GAGTGCTGCCATTTATTTTTGGCTCATTTGCAGTAACGATTCTTTCTGCT    300

BSNT_03730___    301 CTAATCGCTGCGCCGCTTGGCATTGCAGGTGCGATTTTTATGACAGAGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    301 CTAATCGCTGCGCCGCTTGGCATTGCAGGTGCGATTTTTATGACAGAGAT    350

BSNT_03730___    351 TGCCCCGAATTGGGGAAAGAAAGTGCTGCAGCCGGTGATTGAGCTTTTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    351 TGCCCCGAATTGGGGAAAGAAAGTGCTGCAGCCGGTGATTGAGCTTTTAG    400

BSNT_03730___    401 TCGGTATTCCATCTGTTGTTTATGGATTCATAGGTCTTACAGTATTGGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    401 TCGGTATTCCATCTGTTGTTTATGGATTCATAGGTCTTACAGTATTGGTG    450

BSNT_03730___    451 CCGTTTATCGCCCAGTTCAAATCGAGCGGAACAGGGCACAGTTTATTGGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    451 CCGTTTATCGCCCAGTTCAAATCGAGCGGAACAGGGCACAGTTTATTGGC    500

BSNT_03730___    501 GGGAACGATTGTCCTTTCCGTCATGATTCTCCCGACGATCACATCGATTT    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU24980___ps    501 GGGAACGATTGTCCTTTCCGTCATGATTCTGCCGACGATCACATCGATTT    550

BSNT_03730___    551 CTGCTGATGCAATGGCTTCTCTTCCGAAGAGTTTACGAGAGGGTTCTTAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    551 CTGCTGATGCAATGGCTTCTCTTCCGAAGAGTTTACGAGAGGGTTCTTAC    600

BSNT_03730___    601 GCGCTTGGTGCGACAAGATGGCAGACGATCAGAAAAGTACTTGTGCCTGC    650
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU24980___ps    601 GCGCTTGGTGCCACAAGATGGCAGACGATCAGAAAAGTACTTGTGCCTGC    650

BSNT_03730___    651 AGCTTTTCCAACATTGATGACAGCTGTTGTGTTAGGCATGGCTCGGGCGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    651 AGCTTTTCCAACATTGATGACAGCTGTTGTGTTAGGCATGGCTCGGGCGT    700

BSNT_03730___    701 TCGGTGAAGCTTTGGCTGTTCAGATGGTCATTGGAAATACAAGAGTATTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    701 TCGGTGAAGCTTTGGCTGTTCAGATGGTCATTGGAAATACAAGAGTATTG    750

BSNT_03730___    751 CCGGAAAGCCTGTTTGACACTGCGGGAACGCTGACAACGATCATCACGCT    800
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU24980___ps    751 CCGGAAAGCCCGTTTGACACTGCGGGAACGCTGACAACGATCATCACGCT    800

BSNT_03730___    801 GAATATGGGCCACACCACATACGGAAGTGTTGAAAACAATACGCTGTGGT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24980___ps    801 GAATATGGGCCACACCACATACGGAAGTGTTGAAAACAATACGCTGTGGT    850

BSNT_03730___    851 CAATGGGGCTTGTGCTTCTGGTGATGTCATTCCTGTTCATCCTGCTTATT    900
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU24980___ps    851 CAATGGGGCTTGTGCTTCTGGTGATGTCATTCTTGTTCATCCTGCTTATT    900

BSNT_03730___    901 CGCTACTTGTCATCTAGGAGGAAAGTGTAA    930
                     ||||||||||||||||||||||||||||||
BSU24980___ps    901 CGCTACTTGTCATCTAGGAGGAAAGTGTAA    930


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03730 and BSU24980

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
