Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03788 and BSU25440

See Amino acid alignment / Visit BSNT_03788 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:51
# Commandline: needle
#    -asequence dna-align/BSNT_03788___yqeU.1.22522.seq
#    -bsequence dna-align/BSU25440___yqeU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03788___yqeU-BSU25440___yqeU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03788___yqeU-BSU25440___yqeU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03788___yqeU
# 2: BSU25440___yqeU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 771
# Identity:     762/771 (98.8%)
# Similarity:   762/771 (98.8%)
# Gaps:           0/771 ( 0.0%)
# Score: 3774.0
# 
#
#=======================================

BSNT_03788___      1 ATGCAACGATATTTTATCGAGCTCACGAAGCAGCAAATAGAGGAAGCGCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq      1 ATGCAACGATATTTTATCGAGCTCACGAAGCAGCAAATAGAGGAAGCGCC     50

BSNT_03788___     51 GGCTTTTTCGATTACCGGCGAAGATGTTCATCATATTGTGAACGTGATGA    100
                     |.||||||||||||||||||||||.|||||||||||||||||||||||||
BSU25440___yq     51 GACTTTTTCGATTACCGGCGAAGAAGTTCATCATATTGTGAACGTGATGA    100

BSNT_03788___    101 GAATGAATGAGGGAGATCAGATTATCTGCTGCTCTCAAGACGGCTTCGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    101 GAATGAATGAGGGAGATCAGATTATCTGCTGCTCTCAAGACGGCTTCGAG    150

BSNT_03788___    151 GCAAAATGTGAACTTCAATCTGTTTCCAAAGATAAAGTGTCCTGCCTTGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    151 GCAAAATGTGAACTTCAATCTGTTTCCAAAGATAAAGTGTCCTGCCTTGT    200

BSNT_03788___    201 GATAGAATGGACGAATAAAAACAGAGAGCTTCCGATAAAGGTCTATATTG    250
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU25440___yq    201 GATAGAATGGACGAATGAAAACAGAGAGCTTCCGATAAAGGTCTATATTG    250

BSNT_03788___    251 CGAGCGGCCTTCCGAAAGGAGATAAGCTTGAATGGATTATTCAAAAGGGG    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU25440___yq    251 CGAGCGGCCTTCCGAAAGGAGATAAGCTTGAATGGATTATCCAAAAGGGG    300

BSNT_03788___    301 ACTGAGCTCGGAGCTCATGCCTTTATTCCTTTCCAAGCCGCGCGTTCTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    301 ACTGAGCTCGGAGCTCATGCCTTTATTCCTTTCCAAGCCGCGCGTTCTGT    350

BSNT_03788___    351 TGTCAAGCTGGATGACAAAAAGGCAAAGAAAAAGCGGGAAAGATGGACGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    351 TGTCAAGCTGGATGACAAAAAGGCAAAGAAAAAGCGGGAAAGATGGACGA    400

BSNT_03788___    401 AAATTGCAAAGGAAGCGGCTGAGCAATCGTACCGTAACGAAGTGCCGCGA    450
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    401 AAATTGCGAAGGAAGCGGCTGAGCAATCGTACCGTAACGAAGTGCCGCGA    450

BSNT_03788___    451 GTGATGGATGTCCATTCTTTTCAGCAGCTTCTTCAAAGGATGCAGGATTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    451 GTGATGGATGTCCATTCTTTTCAGCAGCTTCTTCAAAGGATGCAGGATTT    500

BSNT_03788___    501 CGATAAATGTGTCGTTGCATACGAGGAGTCATCGAAGCAAGGGGAAATAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    501 CGATAAATGTGTCGTTGCATACGAGGAGTCATCGAAGCAAGGGGAAATAA    550

BSNT_03788___    551 GCGCATTCAGCGCGATTGTAAGCAGCCTTCCGAAAGGATCATCTCTATTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    551 GCGCATTCAGCGCGATTGTAAGCAGCCTTCCGAAAGGATCATCTCTATTG    600

BSNT_03788___    601 ATCGTATTTGGTCCAGAAGGCGGTTTAACAGAAGCTGAGGTTGAACGGCT    650
                     ||||||||||||||.||||||||||||||||||||.||||||||||||||
BSU25440___yq    601 ATCGTATTTGGTCCCGAAGGCGGTTTAACAGAAGCGGAGGTTGAACGGCT    650

BSNT_03788___    651 CACAGAGCAAGACGGTGTGACGTGCGGCCTTGGACCGAGAATTTTAAGGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25440___yq    651 CACAGAGCAAGACGGTGTGACGTGCGGCCTTGGACCGAGAATTTTAAGGA    700

BSNT_03788___    701 CAGAAACCGCTCCGCTATACGCATTGAGCGCGATTTCTTATCAAACAGAG    750
                     ||||||||||||||||||||||.|||||.|||||||||||||||||||||
BSU25440___yq    701 CAGAAACCGCTCCGCTATACGCGTTGAGTGCGATTTCTTATCAAACAGAG    750

BSNT_03788___    751 TTATTAAGAGGTGATCAGTAA    771
                     |||||||||||||||||||||
BSU25440___yq    751 TTATTAAGAGGTGATCAGTAA    771


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.