Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03812 and BSU25600

See Amino acid alignment / Visit BSNT_03812 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence dna-align/BSNT_03812___comER.1.22522.seq
#    -bsequence dna-align/BSU25600___comER.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03812___comER-BSU25600___comER.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03812___comER-BSU25600___comER.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03812___comER
# 2: BSU25600___comER
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     817/822 (99.4%)
# Similarity:   817/822 (99.4%)
# Gaps:           0/822 ( 0.0%)
# Score: 4065.0
# 
#
#=======================================

BSNT_03812___      1 TTGAAGATAGGCTTTATCGGCACAGGAAATATGGGTACGATCCTTATCGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co      1 TTGAAGATAGGCTTTATCGGCACAGGAAATATGGGTACGATCCTTATCGA     50

BSNT_03812___     51 ATCATTTATTGAATCAAAAGCAGCCGATCCCTCAAACATGACAATCACAA    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU25600___co     51 ATCATTTATTGAATCAAAAGCGGCCGATCCCTCAAACATGACAATCACAA    100

BSNT_03812___    101 ACCGCACAATTGAAAAAGCGTTGCACATAAAAAACCGCTACAACAGCATA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    101 ACCGCACAATTGAAAAAGCGTTGCACATAAAAAACCGCTACAACAGCATA    150

BSNT_03812___    151 AACGTTACCGAAAGTCTCGAAAAGCTCGTTTCTGAAAACGAGATGATTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    151 AACGTTACCGAAAGTCTCGAAAAGCTCGTTTCTGAAAACGAGATGATTTT    200

BSNT_03812___    201 TATTTGTGTTAAGCCGCTTGATATATATCCTTTACTGGCAAGAGCGTTAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    201 TATTTGTGTTAAGCCGCTTGATATATATCCTTTACTGGCAAGAGCGTTAC    250

BSNT_03812___    251 CTTATTTAAGAAAAGATCATATTCTCATCTCAATTACAAGCCCCGTTCAA    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU25600___co    251 CTTATTTAAGAAAAGATCATATTCTCATTTCAATTACAAGCCCCGTTCAA    300

BSNT_03812___    301 ACCGAACAGCTCGAACAATATGTGCCGTGTCAAGTGGCTCGAGTGATCCC    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU25600___co    301 ACCGAACAGCTCGAACAATATGTGCCGTGTCAAGTGGCGCGAGTGATCCC    350

BSNT_03812___    351 AAGTATTACGAACAGAGCGCTGGCAGGTGTTTCTCTCGTCACTTTCGGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    351 AAGTATTACGAACAGAGCGCTGGCAGGTGTTTCTCTCGTCACTTTCGGCA    400

BSNT_03812___    401 CAAGCTGCGGCGAATCTGCAAAAACGAAAATCAATGAGCTGATGCAGCAT    450
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU25600___co    401 CAAGCTGCGGCGAATCTGCAAAAGCGAAAATCAATGAGCTGATGCAGCAT    450

BSNT_03812___    451 ATCTCTCATCCGCTGCAAATTGAAAGTGACATCACCAGGGTTGCATCAGA    500
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU25600___co    451 ATCTCTCATCCGCTGCAAATTGAAAGTGACATCACGAGGGTTGCATCAGA    500

BSNT_03812___    501 CATCGTAAGCTGCGGCCCCGCTTTTATGAGCTATCTGATTCAGCGGTTTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    501 CATCGTAAGCTGCGGCCCCGCTTTTATGAGCTATCTGATTCAGCGGTTTA    550

BSNT_03812___    551 TAGATGCAGCTGTTTCGGAAACATCAGTGTCTAAACAGGACGCGATTTTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    551 TAGATGCAGCTGTTTCGGAAACATCAGTGTCTAAACAGGACGCGATTTTG    600

BSNT_03812___    601 ATGTGTAAGGAAATGCTTGTCGGAATGGGAAAACTGTTAGAAACCGAATT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    601 ATGTGTAAGGAAATGCTTGTCGGAATGGGAAAACTGTTAGAAACCGAATT    650

BSNT_03812___    651 GTATACCCTGCCTGCATTACAGGAAAAGGTTTGCGTTAAAGGCGGTGTAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    651 GTATACCCTGCCTGCATTACAGGAAAAGGTTTGCGTTAAAGGCGGTGTAA    700

BSNT_03812___    701 CAGGAGAAGGCATTAAAGCGCTGGAAAGCGGTGTGCAGGATATGTTTCAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    701 CAGGAGAAGGCATTAAAGCGCTGGAAAGCGGTGTGCAGGATATGTTTCAC    750

BSNT_03812___    751 CGGGTATTTCAAAATACTCATATGAAGTACGAGGAGGATATTTCCGCAGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25600___co    751 CGGGTATTTCAAAATACTCATATGAAGTACGAGGAGGATATTTCCGCAGT    800

BSNT_03812___    801 GAAAAAGCAGTTTCATGTGTAG    822
                     ||||||||||||||||||||||
BSU25600___co    801 GAAAAAGCAGTTTCATGTGTAG    822


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