Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03819 and BSU25670

See Amino acid alignment / Visit BSNT_03819 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence dna-align/BSNT_03819___yqeH.1.22522.seq
#    -bsequence dna-align/BSU25670___yqeH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03819___yqeH-BSU25670___yqeH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03819___yqeH-BSU25670___yqeH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03819___yqeH
# 2: BSU25670___yqeH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity:    1095/1101 (99.5%)
# Similarity:  1095/1101 (99.5%)
# Gaps:           0/1101 ( 0.0%)
# Score: 5451.0
# 
#
#=======================================

BSNT_03819___      1 ATGGAAAAGGTTGTTTGTATCGGGTGCGGAGTTACGATCCAAACCGAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq      1 ATGGAAAAGGTTGTTTGTATCGGGTGCGGAGTTACGATCCAAACCGAGGA     50

BSNT_03819___     51 CAAAACAGGTTTGGGGTACGCGCCGCCTGCATCGCTTACGAAAGAAAATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq     51 CAAAACAGGTTTGGGGTACGCGCCGCCTGCATCGCTTACGAAAGAAAATG    100

BSNT_03819___    101 TGATTTGCCAGCGTTGCTTCAGACTGAAAAACTATAATGAAATACAAGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    101 TGATTTGCCAGCGTTGCTTCAGACTGAAAAACTATAATGAAATACAAGAT    150

BSNT_03819___    151 GTCTCCTTAACTGATGATGATTTTTTGAACATTCTTCACGGTATTGGAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    151 GTCTCCTTAACTGATGATGATTTTTTGAACATTCTTCACGGTATTGGAGA    200

BSNT_03819___    201 AACGGACTCTCTTGTCGTAAAAATTGTTGATATTTTTGATTTTAACGGCA    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU25670___yq    201 AACGGACTCTCTGGTCGTAAAAATTGTTGATATTTTTGATTTTAACGGCA    250

BSNT_03819___    251 GCTGGATTAATGGGCTGCAGCGCTTGGTGGGGGGAAACCCTATCTTATTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    251 GCTGGATTAATGGGCTGCAGCGCTTGGTGGGGGGAAACCCTATCTTATTA    300

BSNT_03819___    301 GTTGGCAATAAAGCGGATATTTTGCCTAAGTCACTGAAAAGAGAGCGTCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    301 GTTGGCAATAAAGCGGATATTTTGCCTAAGTCACTGAAAAGAGAGCGTCT    350

BSNT_03819___    351 GATCCAATGGATGAAGCGTGAAGCGAAAGAGCTTGGCTTAAAACCGGTTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    351 GATCCAATGGATGAAGCGTGAAGCGAAAGAGCTTGGCTTAAAACCGGTTG    400

BSNT_03819___    401 ACGTATTTTTGGTCAGTGCGGGACGCGGCCAGGGAATAAGAGAAGTAATT    450
                     ||||||||||||||||||||||.||||||||||||||.||||||||||||
BSU25670___yq    401 ACGTATTTTTGGTCAGTGCGGGTCGCGGCCAGGGAATCAGAGAAGTAATT    450

BSNT_03819___    451 GACGCGATTGAGCATTACCGCAACGGAAAAGACGTCTATGTTGTCGGATG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    451 GACGCGATTGAGCATTACCGCAACGGAAAAGACGTCTATGTTGTCGGATG    500

BSNT_03819___    501 TACAAATGTAGGAAAGTCAACCTTTATTAACCGGATTATTAAAGAAGTGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    501 TACAAATGTAGGAAAGTCAACCTTTATTAACCGGATTATTAAAGAAGTGT    550

BSNT_03819___    551 CAGGTGAAGAAGATATTATTACAACATCCCAATTTCCTGGCACAACCCTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    551 CAGGTGAAGAAGATATTATTACAACATCCCAATTTCCTGGCACAACCCTT    600

BSNT_03819___    601 GATGCGATTGAAATCCCGCTGGATGACGGTTCATCGCTTTATGATACACC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    601 GATGCGATTGAAATCCCGCTGGATGACGGTTCATCGCTTTATGATACACC    650

BSNT_03819___    651 GGGAATTATCAACAACCATCAAATGGCGCATTATGTCAATAAAAAGGATC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU25670___yq    651 GGGAATTATCAACAACCATCAAATGGCGCATTATGTCAATAAAAAGGACC    700

BSNT_03819___    701 TGAAAATATTATCTCCTAAAAAGGAGCTGAAGCCTCGCACATTCCAGCTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    701 TGAAAATATTATCTCCTAAAAAGGAGCTGAAGCCTCGCACATTCCAGCTT    750

BSNT_03819___    751 AATGATCAGCAAACACTGTATTTTGGCGGACTTGCAAGGTTTGATTATGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    751 AATGATCAGCAAACACTGTATTTTGGCGGACTTGCAAGGTTTGATTATGT    800

BSNT_03819___    801 GTCTGGGGAAAGATCTCCTTTTATTTGCTATATGCCGAATGAGCTGATGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    801 GTCTGGGGAAAGATCTCCTTTTATTTGCTATATGCCGAATGAGCTGATGA    850

BSNT_03819___    851 TTCATAGAACAAAACTTGAAAATGCAGACGCGCTTTATGAAAAGCATGCA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    851 TTCATAGAACAAAACTTGAAAATGCAGACGCGCTTTATGAAAAGCATGCA    900

BSNT_03819___    901 GGGGAATTGCTCACACCTCCGGGTAAAGATGAAATGGATGAGTTTCCGGA    950
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU25670___yq    901 GGGGAATTGCTCACACCTCCGGGTAAAGATGAAATGGATGAGTTTCCTGA    950

BSNT_03819___    951 ATTGGTCGCCCATACGTTTACGATAAAAGACAAAAAGACAGATATCGTTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq    951 ATTGGTCGCCCATACGTTTACGATAAAAGACAAAAAGACAGATATCGTTT   1000

BSNT_03819___   1001 TCTCTGGGTTAGGCTGGGTTACTGTCCATGACGCCGATAAAAAGGTAACT   1050
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU25670___yq   1001 TCTCTGGGTTAGGCTGGGTTACTGTCCATGACGCTGATAAAAAGGTAACT   1050

BSNT_03819___   1051 GCATACGCGCCAAAAGGCGTTCATGTATTTGTTCGGCGTTCATTAATTTA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25670___yq   1051 GCATACGCGCCAAAAGGCGTTCATGTATTTGTTCGGCGTTCATTAATTTA   1100

BSNT_03819___   1101 A   1101
                     |
BSU25670___yq   1101 A   1101


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.