Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03820 and BSU25680

See Amino acid alignment / Visit BSNT_03820 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence dna-align/BSNT_03820___yqeG.1.22522.seq
#    -bsequence dna-align/BSU25680___yqeG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03820___yqeG-BSU25680___yqeG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03820___yqeG-BSU25680___yqeG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03820___yqeG
# 2: BSU25680___yqeG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity:     516/519 (99.4%)
# Similarity:   516/519 (99.4%)
# Gaps:           0/519 ( 0.0%)
# Score: 2568.0
# 
#
#=======================================

BSNT_03820___      1 TTGTTAAAAAAGTTTTTTTTACCTGACGAGTTTGTAAAAAATATTTTTCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq      1 TTGTTAAAAAAGTTTTTTTTACCTGACGAGTTTGTAAAAAATATTTTTCA     50

BSNT_03820___     51 TATTACACCTGAGAAATTAAAGGAACGAAATGTAAAAGGGATTATTACTG    100
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU25680___yq     51 TATTACACCTGAGAAATTAAAGGAACGAAATGTAAAAGGAATTATTACTG    100

BSNT_03820___    101 ACCTGGATAATACGCTTGTTGAATGGGACAGACCGAATGCGACGCCGCGA    150
                     |||||||||||||||||||||||||||||||.|||||.||||||||||||
BSU25680___yq    101 ACCTGGATAATACGCTTGTTGAATGGGACAGGCCGAACGCGACGCCGCGA    150

BSNT_03820___    151 TTGATCGAGTGGTTTGAAGAAATGAAGGAACACGGCATTAAAGTGACAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq    151 TTGATCGAGTGGTTTGAAGAAATGAAGGAACACGGCATTAAAGTGACAAT    200

BSNT_03820___    201 TGTCTCTAATAATAACGAAAGAAGAGTGAAACTTTTCTCAGAACCGCTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq    201 TGTCTCTAATAATAACGAAAGAAGAGTGAAACTTTTCTCAGAACCGCTTG    250

BSNT_03820___    251 GAATCCCATTCATCTATAAAGCAAGAAAACCGATGGGTAAAGCCTTTAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq    251 GAATCCCATTCATCTATAAAGCAAGAAAACCGATGGGTAAAGCCTTTAAT    300

BSNT_03820___    301 AGAGCGGTGCGCAATATGGAGCTGAAAAAAGAGGACTGCGTTGTCATCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq    301 AGAGCGGTGCGCAATATGGAGCTGAAAAAAGAGGACTGCGTTGTCATCGG    350

BSNT_03820___    351 AGACCAGCTGCTGACCGATGTACTCGGGGGAAACCGAAACGGCTACCATA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq    351 AGACCAGCTGCTGACCGATGTACTCGGGGGAAACCGAAACGGCTACCATA    400

BSNT_03820___    401 CGATTTTGGTCGTGCCAGTCGCTTCCTCTGACGGATTCATTACGCGCTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq    401 CGATTTTGGTCGTGCCAGTCGCTTCCTCTGACGGATTCATTACGCGCTTT    450

BSNT_03820___    451 AACCGCCAGGTCGAACGCAGAATACTGAGTGCTCTCAAACGAAAAGGGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25680___yq    451 AACCGCCAGGTCGAACGCAGAATACTGAGTGCTCTCAAACGAAAAGGGCA    500

BSNT_03820___    501 CATTCAGTGGGAGGAGTAA    519
                     |||||||||||||||||||
BSU25680___yq    501 CATTCAGTGGGAGGAGTAA    519


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.