Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00919 and BSU25780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:21
# Commandline: needle
# -asequence dna-align/BSNT_00919.1.22522.seq
# -bsequence dna-align/BSU25780___arsC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00919-BSU25780___arsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00919-BSU25780___arsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00919
# 2: BSU25780___arsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 140/420 (33.3%)
# Similarity: 140/420 (33.3%)
# Gaps: 249/420 (59.3%)
# Score: 458.5
#
#
#=======================================
BSNT_00919 0 -------------------------------------------------- 0
BSU25780___ar 1 ATGGAGAATAAAATCATTTACTTTTTATGTACAGGGAACTCTTGCCGGAG 50
BSNT_00919 0 -------------------------------------------------- 0
BSU25780___ar 51 CCAAATGGCTGAAGGATGGGCTAAACAATATTTAGGTGATGAGTGGAAAG 100
BSNT_00919 1 ----------------------------ATGACAT-CGAGTGCTGTCAAA 21
||.|.|| |||.||||||.|||
BSU25780___ar 101 TGTATAGCGCGGGGATAGAAGCACATGGATTAAATCCGAATGCTGTTAAA 150
BSNT_00919 22 GCAATGAAAGAAGCAGGGATTGATATTTCAAATCAAAC----------AT 61
||.|||||.||||..||.||.|||||.||.|||||||| ||
BSU25780___ar 151 GCGATGAAGGAAGTTGGTATAGATATCTCTAATCAAACGTCAGATATAAT 200
BSNT_00919 62 CG------------------------------------------------ 63
||
BSU25780___ar 201 CGATTCTGATATTCTGAACAATGCTGATTTAGTTGTTACGCTTTGTGGAG 250
BSNT_00919 64 --------GATAAA------------------------------------ 69
||||||
BSU25780___ar 251 ATGCTGCTGATAAATGCCCGATGACGCCTCCACATGTAAAACGTGAGCAT 300
BSNT_00919 70 ------TTTGA-GATCCGGCAAAAGCACACGGAACAGAAGAA-------- 104
||||| ||||||||||.||||||.||.|||||||||
BSU25780___ar 301 TGGGGTTTTGATGATCCGGCAAGAGCACAAGGGACAGAAGAAGAAAAATG 350
BSNT_00919 105 ---GTGTTTCCAAAGGGTCCGTGCTGAAATTGGTGACCGTTTAAAACAGT 151
||.|||||||||.||.||||.||||||.||..|..|.||.||..|.|
BSU25780___ar 351 GGCGTTTTTCCAAAGAGTTCGTGATGAAATAGGGAATAGGTTGAAGGAAT 400
BSNT_00919 152 TTGCTGTAACTGGGAAATAA 171
||||||.|||.|||||||||
BSU25780___ar 401 TTGCTGAAACAGGGAAATAA 420
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