Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05024 and BSU25900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_05024___xlyA.1.22522.seq
# -bsequence dna-align/BSU25900___cwlA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05024___xlyA-BSU25900___cwlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05024___xlyA-BSU25900___cwlA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05024___xlyA
# 2: BSU25900___cwlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1023
# Identity: 575/1023 (56.2%)
# Similarity: 575/1023 (56.2%)
# Gaps: 285/1023 (27.9%)
# Score: 1577.0
#
#
#=======================================
BSNT_05024___ 1 ATG------------GTAAACATTATCCAAGACT-TCATTCCGAAAG--- 34
||| |||||.|.| |.||.|| |.|.|| ||||
BSU25900___cw 1 ATGGCCATTAAAGTTGTAAAGAAT---CTAGTCTCTAAATC--AAAGTAT 45
BSNT_05024___ 35 -----GAAATAAAAACAGACCAGCAT-ACCCTATGAATCCTCATTATATT 78
||||| |.|| | |.||.|||||..||.|.|||||.
BSU25900___cw 46 GGATTGAAAT-------GTCC----TAATCCAATGAAAGCTGAATATATC 84
BSNT_05024___ 79 ACAGTTCATAATACTTCGAATACTGCGAAAGGGGCAGACGCTGCCAGTCA 128
||..|||||||.|||.|||||..|||...| ||.||||.|.|
BSU25900___cw 85 ACTATTCATAACACTGCGAATGATGCTTCA---------GCAGCCAATGA 125
BSNT_05024___ 129 ---TGCTCGGTATGTTAAAAATCCGGAAAC---AG--CAACCAGCTGGCA 170
|.|| ||..|.||.||| ||| || ||||.||.|..||
BSU25900___cw 126 GATTTCT---TACATGAAGAAT-----AACTCTAGCTCAACAAGTTTTCA 167
BSNT_05024___ 171 CTTTACTGTGGATGATAAAGAGATTTA-TCA--GCACCTTCCTTTAAATG 217
||||.|.||.||.||||||.| |.|.| ||| |.| |||| ||.|
BSU25900___cw 168 CTTTGCAGTAGACGATAAACA-AGTCATTCAAGGTA--TTCC----AACG 210
BSNT_05024___ 218 AA----AATGGCTGGCATGCAGGAGACGG---AAACGGGACAGGAAACCG 260
|| ||.|..|||||..|||||||.|| ||||||.|||||.||.||
BSU25900___cw 211 AATCGTAACGCTTGGCACACAGGAGATGGAACAAACGGTACAGGGAATCG 260
BSNT_05024___ 261 TAAATCAATTGGTATTGAAATCTGTGAAAATAGC-------GATGGG--- 300
.||.||.||||||.|.|||||.||| .||||| ||.|||
BSU25900___cw 261 CAAGTCTATTGGTGTCGAAATTTGT---TATAGCAAGTCAGGAGGGGTAC 307
BSNT_05024___ 301 GATTT-------TGAAAAAGCT--GTTTCAAAT-----GCTCAATGGCTT 336
|||.| .|.||||||| .|.|.||.| |||||....|||
BSU25900___cw 308 GATATAAGGCAGCGGAAAAGCTTGCTATTAAGTTTGTGGCTCAGCTACTT 357
BSNT_05024___ 337 ATCAAGAA-ATTGATGAAAGAACAGGGGATTTCT----TTTGCAAATGTC 381
| ||||| .|.|||| |||.|||..| |..|||||
BSU25900___cw 358 A--AAGAACGTGGATG--------GGGTATTGATCGAGTCCGCAAA---- 393
BSNT_05024___ 382 GTGCCTCAT-AAGCATTGGTCAGGTAAAGAGTGCCCTCGGAAGTTGCTGA 430
||| ||| |.|||...|||||..|.||||| |.
BSU25900___cw 394 ------CATCAAG-ACTGGAATGGTAAGTATTGCCC------------GC 424
BSNT_05024___ 431 ACCGTTGGGATTCATTTAAAGCAGGGATCAGCGG--TGCTGCATCTTCGC 478
|||| ||||| ..||||.|| .|.||.||
BSU25900___cw 425 ACCG--------CATTT--------TGTCAGAGGGAAGATGGAT------ 452
BSNT_05024___ 479 CGACAAAAACGGTTAAGAAAACCGCCGGAGATACCTACA-------CAGT 521
.||| ||||||| ||.|| |||
BSU25900___cw 453 --TCAA-----GTTAAGA----------------CTGCAATTGAAGCAG- 478
BSNT_05024___ 522 CAAAAAAGGCGATACTCTTTCCGAAATTGCAAAAGAGCACGGGGTGAGTG 571
|||||.||| |||.
BSU25900___cw 479 ------------------------AATTGAAAA-------------AGTT 491
BSNT_05024___ 572 TGGCAAATCTTCAGAGCTGGAATAACATTAAAGACCCT-AATAAAATCAC 620
.||| ||||.||| ||| || ||..|||.||
BSU25900___cw 492 GGGC--------------GGAAAAAC---AAA----CTCAAGCAAAGCA- 519
BSNT_05024___ 621 AGT-TGGCCAAAAGTTAAAGCTCACAGGCTCAAGCACTTCAAGCACTAAA 669
||| |.||.||||...||| ||| |||.||
BSU25900___cw 520 AGTGTAGCTAAAAAGAAAA-----------CAA------CAAACA----- 547
BSNT_05024___ 670 CCAAGCAGCAAAAAAACGTCATATGCGCTGCCTTCTGGAACCTTTAAAGT 719
||||||||||||||||||||||||||||.||.||.||.|..||||||||
BSU25900___cw 548 -CAAGCAGCAAAAAAACGTCATATGCGCTACCATCCGGTATTTTTAAAGT 596
BSNT_05024___ 720 AACTAACCCTATGCGAAAAGGTGATGACGTAAGGCGGATTCAAAAAGCGT 769
.|..|.|||.|||...|.|||.||..|.||||..|..|||||||||||..
BSU25900___cw 597 GAAGAGCCCAATGATGAGAGGGGAAAAGGTAACACAAATTCAAAAAGCAC 646
BSNT_05024___ 770 TGGCGGCTCTTTATTTCTACCCGGACAAGGGAGCGAAGAATAACGGTATC 819
||||.||.||.||.||.||||||||.||.|||||.||.||.|||||.||.
BSU25900___cw 647 TGGCTGCACTATACTTTTACCCGGATAAAGGAGCAAAAAACAACGGCATT 696
BSNT_05024___ 820 GACGGCGTGTATGGACCGAAAACAGCAAACGCAGTCAAGCGGTTCCAGTC 869
||||||||||||||.||||||||||||.|.|||.|.|..||.||||||||
BSU25900___cw 697 GACGGCGTGTATGGTCCGAAAACAGCAGATGCAATTAGACGATTCCAGTC 746
BSNT_05024___ 870 TATGTACGGGCTTACTCAAGACGGCATTTATGGTTCTAAGACTAAAGCGA 919
||||||||||||||||||||||||.|||||.||..|.||.||.|||||||
BSU25900___cw 747 TATGTACGGGCTTACTCAAGACGGTATTTACGGACCAAAAACGAAAGCGA 796
BSNT_05024___ 920 AACTTGAATCACTATTGAAGTAA 942
||||||||.|.||.|||||||||
BSU25900___cw 797 AACTTGAAGCTCTCTTGAAGTAA 819
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