Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05026 and BSU25910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_05026___yqxH.1.22522.seq
# -bsequence dna-align/BSU25910___yqxH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05026___yqxH-BSU25910___yqxH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05026___yqxH-BSU25910___yqxH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05026___yqxH
# 2: BSU25910___yqxH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 424
# Identity: 311/424 (73.3%)
# Similarity: 311/424 (73.3%)
# Gaps: 2/424 ( 0.5%)
# Score: 1091.0
#
#
#=======================================
BSNT_05026___ 1 ATGGAGGATACAACTGTGTTTATTAATTTTGAAACATTGGATTTAGCGAG 50
||||||||.||||.|.|||||||.||||||||||||||.||||||||.||
BSU25910___yq 1 ATGGAGGAGACAAGTTTGTTTATCAATTTTGAAACATTAGATTTAGCAAG 50
BSNT_05026___ 51 AGTTTATCTGTTTGGGGGTGTAAAATATCTTGATTTAATGCTGGTGCTAA 100
|||.|||.|.|||||.||.||.||.||.|||||||||.|.||.||.||.|
BSU25910___yq 51 AGTATATTTATTTGGAGGGGTGAAGTACCTTGATTTACTTCTAGTACTTA 100
BSNT_05026___ 101 ACATCATTGATATCCTTACCGGTGTGGTGAAAGCGTGGAAGTTTAAGGAG 150
.|||.|||||..|..|.||.||.||..|.||.||.|||||.||.||..|.
BSU25910___yq 101 GCATAATTGACGTTTTAACAGGAGTAATCAAGGCATGGAAATTCAAAAAA 150
BSNT_05026___ 151 CTCCGCAGCCGTAGCGCGTGGTTCGGTTATGTGCGTAAGATGCTGAGTTT 200
||.||.||.||.|||||.|||||.||.|||||.||.|||.|.||.|.|||
BSU25910___yq 151 CTGCGAAGTCGAAGCGCATGGTTTGGCTATGTCCGCAAGCTACTCAATTT 200
BSNT_05026___ 201 TTTGGTGGTCATTGTGGCAAATATCGTAGATACAATCCTCAATTTGAACG 250
.||.|.|||||||.|.|||||..|..|.||||||.|.|||||||||||||
BSU25910___yq 201 CTTTGCGGTCATTTTAGCAAACGTGATTGATACAGTACTCAATTTGAACG 250
BSNT_05026___ 251 GTGTCCTGACATTTGGAACCGTTCTTTTTTATATCGCCAATGAGGGGCTT 300
|||||.|.||.|||||.||||||||||||||||||||.|||||.||..|.
BSU25910___yq 251 GTGTCTTAACCTTTGGTACCGTTCTTTTTTATATCGCTAATGAAGGTTTG 300
BSNT_05026___ 301 TCCATTACGGAGAACCTGGCACAGATCGGCGTTAAGATTCCGGCTGCTAT 350
||.||.||.||.|||.|.||||||||.||.|||||.||.||..|..|.||
BSU25910___yq 301 TCAATAACTGAAAACTTAGCACAGATTGGTGTTAAAATACCATCATCAAT 350
BSNT_05026___ 351 CACGGACCGGCTTCACGTAATCGAAAATGACAACGAACAAACAAATGAA- 399
.||.||.||..|.||...|||.||.||.||.||.|||||.|..|| |||
BSU25910___yq 351 AACAGATCGATTACAAACAATTGAGAACGAAAAAGAACAGAGTAA-GAAT 399
BSNT_05026___ 400 AAGGATGAACAGGCTGCTGGATAA 423
||.|..||..|.||||||||.|||
BSU25910___yq 400 AACGCAGACAAAGCTGCTGGCTAA 423
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