Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03885 and BSU26760

See Amino acid alignment / Visit BSNT_03885 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence dna-align/BSNT_03885___yrdC.1.22522.seq
#    -bsequence dna-align/BSU26760___yrdC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03885___yrdC-BSU26760___yrdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03885___yrdC-BSU26760___yrdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03885___yrdC
# 2: BSU26760___yrdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 567
# Identity:     561/567 (98.9%)
# Similarity:   561/567 (98.9%)
# Gaps:           3/567 ( 0.5%)
# Score: 2782.0
# 
#
#=======================================

BSNT_03885___      1 GTGGAAGAAAAGAAAAAAGCTTTAATCATTGTGGATGTACAAAAAGCCTT     50
                     ||||||||||||   |||||||||||||||||||||||||||||||||||
BSU26760___yr      1 GTGGAAGAAAAG---AAAGCTTTAATCATTGTGGATGTACAAAAAGCCTT     47

BSNT_03885___     51 TGATGATAAAAAATGGGGGGAACGGAATAACGTAAAGGCGGAAGAAAACA    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr     48 CGATGATAAAAAATGGGGGGAACGGAATAACGTAAAGGCGGAAGAAAACA     97

BSNT_03885___    101 TTAGTAAAATACTAAAATTATGGAGAGAAAAAGGATGGACAGTCATATAC    150
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU26760___yr     98 TTAGTAAAATACTAGAATTATGGAGAGAAAAAGGATGGACAGTCATATAC    147

BSNT_03885___    151 ATACAACACACTTCTGATAAACCTCATTCTTTATTCCATCCAAAGAATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    148 ATACAACACACTTCTGATAAACCTCATTCTTTATTCCATCCAAAGAATGA    197

BSNT_03885___    201 AGGGTTTGCGATAAAGGAAATAGTTAAGCCTATGGATGAAGAAGTCATTA    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    198 AGGGTTTGCAATAAAGGAAATAGTTAAGCCTATGGATGAAGAAGTCATTA    247

BSNT_03885___    251 TAACCAAGACAGTAAATAGCAGCTTTATTGGTACGAATTTAGAAGAATTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    248 TAACCAAGACAGTAAATAGCAGCTTTATTGGTACGAATTTAGAAGAATTC    297

BSNT_03885___    301 TTAAAATTAAATGAAATAACCACTGTAGTCATAACTGGTTTAACCACGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    298 TTAAAATTAAATGAAATAACCACTGTAGTCATAACTGGTTTAACCACGCC    347

BSNT_03885___    351 TCACTGTGTATCAACCACCACAAGAATGAGTGGTAATTTAGGGTTTGATA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    348 TCACTGTGTATCAACCACCACAAGAATGAGTGGTAATTTAGGGTTTGATA    397

BSNT_03885___    401 CATACCTGATTTCAGATGCAACAGCAGCCTTCGGAATGAGAGACCAAAAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    398 CATACCTGATTTCAGATGCAACAGCAGCCTTCGGAATGAGAGACCAAAAT    447

BSNT_03885___    451 GATACATATTATGATGCGGCGACTATTCATAATATATCTCTAGCTACATT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    448 GATACATATTATGATGCGGCGACTATTCATAATATATCTCTAGCTACATT    497

BSNT_03885___    501 GCATGATGAATTTGCCACAATATTGACAACTGATCAATTAATAAATGATT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26760___yr    498 GCATGATGAATTTGCCACAATATTGACAACTGATCAATTAATAAATGATT    547

BSNT_03885___    551 TTATAAAAACTCACTGA    567
                     |||||||||||||||||
BSU26760___yr    548 TTATAAAAACTCACTGA    564


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