Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03933 and BSU27140
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:05
# Commandline: needle
# -asequence dna-align/BSNT_03933.1.22522.seq
# -bsequence dna-align/BSU27140___oatA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03933-BSU27140___oatA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03933-BSU27140___oatA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03933
# 2: BSU27140___oatA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1905
# Identity: 1160/1905 (60.9%)
# Similarity: 1160/1905 (60.9%)
# Gaps: 714/1905 (37.5%)
# Score: 5676.0
#
#
#=======================================
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 1 ATGTATCACAAGACACAGCATCATCGATACATTCCTGGACTTGATGGCCT 50
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 51 TCGGGCTTTCGCCGTCCTGTCAGTTATCACTTATCACCTAAATTTCAATT 100
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 101 GGGCTAACGGTGGTTTTATCGGGGTTGATATCTTTTTTGTTTTATCCGGA 150
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 151 TATTTGATTACATCTATTCTATTACCGGCATATGGAAATGATATCAATCT 200
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 201 TGATTTTCGGGATTTTTGGGTGCGCCGCATTCGGCGGCTTCTCCCGGCAG 250
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 251 CGTACCTTATGATCTTTTCCACTGTTGTGTGGGTCGTATTGTTTGATCGA 300
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 301 GAACTATTGCACACTGTACGTGGAGATGCGATCTCTTCTCTCTTTTATAT 350
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 351 GAGCAATTGGTGGTTTATTTTTCACAAGCTATCATATTTTGATAGTTTCG 400
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 401 GTTCCCCATCACCTCTAAAAAACCTTTGGTCGCTGGCGATTGAAGAACAA 450
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 451 TTTTATATCATATGGCCGATGTTTTTAGTTGTTGGAATGTACATAATGAA 500
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 501 AAGCCGCGCCAGATTGGCTGCGGTGATATCATTGCTTGTGCTTTGTTCAG 550
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 551 CCGTGATGATGAGCGTACTGTATGAACCTGGCGGAGATCCGAGCCGCGTT 600
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 601 TACTATGGCACAGACACTCGTTCGTTTGAACTTCTCATCGGATGTGCCTT 650
BSNT_03933 0 -------------------------------------------------- 0
BSU27140___oa 651 GGCTTTGGTATGGCCGATGAAAAGGCTGTCTTCCAACAGGCTGCCAAGCA 700
BSNT_03933 1 --------------TTGCACGCGACTGAATTTTCGGCATTTTGTATTTTA 36
||||||||.||||||||||.||||||||||||||||
BSU27140___oa 701 AACTGAAGCACACTTTGCACGCCACTGAATTTTTGGCATTTTGTATTTTA 750
BSNT_03933 37 GTGTTGTGTGTCTATTTCACAGATGAATACGAGCCTTTTCTTTACAGAGG 86
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 751 GTGTTGTGTGTCTATTTCACAGATGAATACGAGCCTTTTCTTTACAGAGG 800
BSNT_03933 87 CGGAATGCTATTCATTAGCGTAACTGCCGCAATCCTTATTGCATGTGTTT 136
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU27140___oa 801 CGGAATGCTATTCATTAGCGTGACTGCCGCAATCCTTATTGCATGTGTTT 850
BSNT_03933 137 GCCATCCGAGCAGCTTTTTAGGCAATCTGCTTTCATGGAGGCCGCTTCGG 186
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 851 GCCATCCGAGCAGCTTTTTAGGCAATCTGCTTTCATGGAGGCCGCTTCGG 900
BSNT_03933 187 TGGCTTGGAGCGAGGTCTTACGGAATTTATCTTTGGCACTACCCTGTTAT 236
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 901 TGGCTTGGAACGAGGTCTTACGGAATTTATCTTTGGCACTACCCTGTTAT 950
BSNT_03933 237 TGTGTTAAGCACGCCAGTTCAAGAAATCGGAAACCCTGTTTTTTGGCATA 286
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 951 TGTGTTAAGCACGCCAGTTCAAGAAATCGGAAACCCTGTTTTTTGGCATA 1000
BSNT_03933 287 TCGTGCTAAAGGTCATTGTGACATGTATACTTGCCGAGCTTTCCTATCTT 336
||||||||||||||||||||||||||||||||||||||||.|||||.|.|
BSU27140___oa 1001 TCGTGCTAAAGGTCATTGTGACATGTATACTTGCCGAGCTCTCCTACCAT 1050
BSNT_03933 337 TTTATTGAGAAGCCGGTACGGACACAGGGATTTAGGCCATTTTTCCGCCG 386
|||||||||||||||.||||||||||||||||||||.||||||.||||||
BSU27140___oa 1051 TTTATTGAGAAGCCGATACGGACACAGGGATTTAGGTCATTTTCCCGCCG 1100
BSNT_03933 387 TGTTTTGATACATAGAATCAAGGAATGGAAAACGACATCTGTCATCAGCA 436
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1101 TGTTTTTATACATAGAATCAAGGAATGGAAAACGACATCTGTCATCAGCA 1150
BSNT_03933 437 AAATGTCAATTGGTTTCATTATTTTCGCTATACTTATTTTTGCAGGCGGG 486
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1151 AAATGTCAATTGGTTTCATTATTTTCGCTATACTTATTTTTGCAGGCGGG 1200
BSNT_03933 487 CTGTCAGGGCTAGCCGGAGAGCAAAAGCATCCTACTAAATGGACCTATAG 536
|||||||||||||||||.|||||||||||.|||||.||||||||||||||
BSU27140___oa 1201 CTGTCAGGGCTAGCCGGCGAGCAAAAGCACCCTACCAAATGGACCTATAG 1250
BSNT_03933 537 CTCACAAGAAACAAATGCTGACACCAGCCAGGCTTCTGGGGATAAAAAGA 586
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1251 CTCACAAGAAACAAATGCTGACACCAGCCAGGCTTCTGGGGATAAAAAGA 1300
BSNT_03933 587 ACGCTGCAGCAGATAAAAAACACAATCCTGAACAAAAAACAACAGATTCC 636
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27140___oa 1301 ACGCTGCAGCAGATAAAAAACACAATCCTGAACAAAAGACAACAGATTCC 1350
BSNT_03933 637 ATTCAGGGTCAAAAGGAAAACAAAGATAGTGGGCAAGAGACTCATAAAAA 686
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1351 AATCAGGGTCAAAAGGAAAACAAAGATAGTGGGCAAGAGACTCATAAAAA 1400
BSNT_03933 687 GAAAGACACGCAATCTCAACAGACGAAAGAACCCGCAGATACTGCGAAAG 736
|||||||||||||||.||||||..||||.||||.|||||.||||||||||
BSU27140___oa 1401 GAAAGACACGCAATCCCAACAGTTGAAAAAACCAGCAGACACTGCGAAAG 1450
BSNT_03933 737 AGGTGTTAGCTATAGGAGATTCCGTCATGCTTGATATTTCTTCACACCTG 786
|.||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1451 AAGTTTTAGCTATAGGAGATTCCGTCATGCTTGATATTTCTTCACACCTG 1500
BSNT_03933 787 CGTCAGTCACTTTCACATGTGACGATTGATGGAAAGGTAGGAAGACAAAT 836
|||||||||.|||||.|||||||||||||||||||||||||.||||||||
BSU27140___oa 1501 CGTCAGTCATTTTCAAATGTGACGATTGATGGAAAGGTAGGGAGACAAAT 1550
BSNT_03933 837 GTCTCAAGCTTTGGAACTCGCAAGGGAGTACAAGTCTTTTAATCAGCCGA 886
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27140___oa 1551 GTCTCAAGCTTTGGAACTCGCAAGGGAATACAAGTCTTTTAATCAGCCGA 1600
BSNT_03933 887 ACAAGGCTGTCATCATTGAGCTTGGAACCAATGGCTACTTTACAAACAGC 936
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU27140___oa 1601 ACAAGGCTGTCATCATTGAGCTTGGAACCAATGGCTATTTTACAAACAGC 1650
BSNT_03933 937 CAAATCGAACAACTGCTTCAATCTTTCTCAAAAGCCCATATCTATCTTGT 986
|||||||||||||||||||||||||||||||||||.|||||.||||||||
BSU27140___oa 1651 CAAATCGAACAACTGCTTCAATCTTTCTCAAAAGCTCATATTTATCTTGT 1700
BSNT_03933 987 CAATACACGGGTTCCCCGCCAATGGGAAAGCAAGGTAAATGAATCTTTGC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1701 CAATACACGGGTTCCCCGCCAATGGGAAAGCAAGGTAAATGAATCTTTGC 1750
BSNT_03933 1037 AGCAACAGGCCCACGCACATCAAAATGTTACGTTAGTTGACTGGCATACA 1086
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1751 AGCAACAGGCCCACGCACATCAAAATGTTACGTTAGTTGACTGGCATACA 1800
BSNT_03933 1087 GAAGCTCTTCAGCATCCGGAATATTTTACCCCTGATGGTGTTCACTTGGT 1136
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1801 GAAGCTCTTCAGCATCCGGAATATTTTACCCCTGATGGTGTTCACTTGGT 1850
BSNT_03933 1137 TCCTAAAGGGGCAAAAACTTTGACTGCTCTTATTGTTCAGGCGATGAAAT 1186
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27140___oa 1851 TCCTAAAGGGGCAAAAACTTTGACTGCTCTTATTGTTCAGGCGATGAAAT 1900
BSNT_03933 1187 CGTAA 1191
|||||
BSU27140___oa 1901 CGTAA 1905
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