Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03946 and BSU27200

See Amino acid alignment / Visit BSNT_03946 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:06
# Commandline: needle
#    -asequence dna-align/BSNT_03946___yrhG.1.22522.seq
#    -bsequence dna-align/BSU27200___yrhG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03946___yrhG-BSU27200___yrhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03946___yrhG-BSU27200___yrhG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03946___yrhG
# 2: BSU27200___yrhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 801
# Identity:     793/801 (99.0%)
# Similarity:   793/801 (99.0%)
# Gaps:           0/801 ( 0.0%)
# Score: 3933.0
# 
#
#=======================================

BSNT_03946___      1 ATGGCTTTTCGAAAACCGGATGAAATAGCGGAAGCAGCAATTGAAGCAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr      1 ATGGCTTTTCGAAAACCGGATGAAATAGCGGAAGCAGCAATTGAAGCAGG     50

BSNT_03946___     51 GATGAAAAAAATAAAGCTCCCGTTGCCGTCACTGCTTGCGCTGGGGTTTT    100
                     ||||||||||||||||||||||.|||||||||||||||.|||||||||||
BSU27200___yr     51 GATGAAAAAAATAAAGCTCCCGCTGCCGTCACTGCTTGTGCTGGGGTTTT    100

BSNT_03946___    101 TAGGCGGTGCATTTATTGCGCTTGGGTATTTGCTTGATATCAGGGTAATC    150
                     ||||||||||||||||.||||||||||||||||||||||||||||||||.
BSU27200___yr    101 TAGGCGGTGCATTTATCGCGCTTGGGTATTTGCTTGATATCAGGGTAATT    150

BSNT_03946___    151 GGCGATCTTCCGAAAGAATGGGGGAGCCTGTCCAGTTTGATTGGTGCAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    151 GGCGATCTTCCGAAAGAATGGGGGAGCCTGTCCAGTTTGATTGGTGCAGC    200

BSNT_03946___    201 AGTATTTCCCGTCGGTCTGATCCTTGTCGTTCTCGCTGGCGCTGAACTGA    250
                     |||||||||.|||||.||||||||||||||||||||||||||||||||||
BSU27200___yr    201 AGTATTTCCAGTCGGCCTGATCCTTGTCGTTCTCGCTGGCGCTGAACTGA    250

BSNT_03946___    251 TCACAGGCAATATGATGTCAGTTGCGATGGCGTTATTTTCGAGAAAAATA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    251 TCACAGGCAATATGATGTCAGTTGCGATGGCGTTATTTTCGAGAAAAATA    300

BSNT_03946___    301 TCAGTAAAAGAGTTAGCGATTAACTGGGGAATCGTCACAATTATGAACTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    301 TCAGTAAAAGAGTTAGCGATTAACTGGGGAATCGTCACAATTATGAACTT    350

BSNT_03946___    351 AATCGGCGCATTGTTTGTTGCGTACTTTTTCGGGCATTTGGTTGGATTGA    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU27200___yr    351 AATCGGCGCATTGTTTGTTGCTTACTTTTTCGGGCATTTGGTTGGATTGA    400

BSNT_03946___    401 CTGAAACAGGTCCTTATTTAGAAAAAACGATTGCCGTTGCCCAAGGAAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    401 CTGAAACAGGTCCTTATTTAGAAAAAACGATTGCCGTTGCCCAAGGAAAG    450

BSNT_03946___    451 CTTGATATGAGCTTTGGCAAGGTTCTCATTTCCGCCATCGGCTGTAACTG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    451 CTTGATATGAGCTTTGGCAAGGTTCTCATTTCCGCCATCGGCTGTAACTG    500

BSNT_03946___    501 GCTTGTATGTCTTGCAGTGTGGCTTTCTTTCGGCGCCCAAGACGCAGCAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    501 GCTTGTATGTCTTGCAGTGTGGCTTTCTTTCGGCGCCCAAGACGCAGCAG    550

BSNT_03946___    551 GAAAAATCCTTGGCATCTGGTTCCCAACCATGGCTTTTGTGGCTATCGGA    600
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27200___yr    551 GAAAAATCCTTGGCATCTGGTTCCCAATCATGGCTTTTGTGGCTATCGGA    600

BSNT_03946___    601 TTTCAGCACGTTGTCGCCAACATGTTTGTGATTCCTGCTGCCATTTTTGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    601 TTTCAGCACGTTGTCGCCAACATGTTTGTGATTCCTGCTGCCATTTTTGC    650

BSNT_03946___    651 AGGCTCATTCACGTGGGGGCAGTTCATCGGAAACATCATTCCGGCTTTTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    651 AGGCTCATTCACGTGGGGGCAGTTCATCGGAAACATCATTCCGGCTTTTA    700

BSNT_03946___    701 TCGGTAATGTCATCGGCGGAGCTGTATTTGTCGGTCTCATTTATTTTATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    701 TCGGTAATGTCATCGGCGGAGCTGTATTTGTCGGTCTCATTTATTTTATT    750

BSNT_03946___    751 GCATATCATAAGAAAGACCGCTCCAGAAAAGAAATGAAGCAGGTGTCATG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27200___yr    751 GCATATCATAAGAAAGACCGCTCCAGAAAAGAAATGAAGCAGGTGTCATG    800

BSNT_03946___    801 A    801
                     |
BSU27200___yr    801 A    801


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.