Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03956 and BSU27240

See Amino acid alignment / Visit BSNT_03956 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:07
# Commandline: needle
#    -asequence dna-align/BSNT_03956___yrhC.1.22522.seq
#    -bsequence dna-align/BSU27240___yrhC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03956___yrhC-BSU27240___yrhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03956___yrhC-BSU27240___yrhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03956___yrhC
# 2: BSU27240___yrhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity:     228/231 (98.7%)
# Similarity:   228/231 (98.7%)
# Gaps:           0/231 ( 0.0%)
# Score: 1128.0
# 
#
#=======================================

BSNT_03956___      1 TTGCACAAAAATAGAATGAAATCTTTAAAAGAAGACTACAAGCATTTTGC     50
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU27240___yr      1 TTGAACAAAAATAGAATGAAATCTTTAAAAGAAGACTACAAGCATTTTGC     50

BSNT_03956___     51 TTTTACATTGCTTGCAGTCAGCACTTTTTTATATATAGGTGCAGTTCTCC    100
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU27240___yr     51 TTTTACATTGCTTGCAGTCAGCACTTTTTTATATATAGGCGCAGTTCTCC    100

BSNT_03956___    101 CTGATCAAGGCTTAACATTAGGCCAGAAATCGACGATGTTTTTAGCGGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27240___yr    101 CTGATCAAGGCTTAACATTAGGCCAGAAATCGACGATGTTTTTAGCGGAT    150

BSNT_03956___    151 TGCGTATTTTTAGCCGGTGCCTTCTTTTGCGCTGACCGTTCACTTATTTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27240___yr    151 TGCGTATTTTTAGCCGGTGCCTTCTTTTGCGCTGACCGTTCACTTATTTA    200

BSNT_03956___    201 CAAGAAGCGTCTGGAAGAAGCTGACGAATAA    231
                     |||||||||||||||||||||.|||||||||
BSU27240___yr    201 CAAGAAGCGTCTGGAAGAAGCCGACGAATAA    231


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