Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03961 and BSU27280

See Amino acid alignment / Visit BSNT_03961 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:08
# Commandline: needle
#    -asequence dna-align/BSNT_03961___yrrT.1.22522.seq
#    -bsequence dna-align/BSU27280___yrrT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03961___yrrT-BSU27280___yrrT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03961___yrrT-BSU27280___yrrT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03961___yrrT
# 2: BSU27280___yrrT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity:     630/642 (98.1%)
# Similarity:   630/642 (98.1%)
# Gaps:           0/642 ( 0.0%)
# Score: 3102.0
# 
#
#=======================================

BSNT_03961___      1 ATGGGACGTGAATTTATCCCTCTCTTTGAAGATTGGGCAGCAACTTATGA     50
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr      1 ATGGGCCGTGAATTTATCCCTCTCTTTGAAGATTGGGCAGCAACTTATGA     50

BSNT_03961___     51 CCAAACAGTACAAGGTTTAGATATTCAGTATAAAGAAGCGTTCAGAGGCT    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr     51 TCAAACAGTACAAGGTTTAGATATTCAGTATAAAGAAGCGTTCAGAGGCT    100

BSNT_03961___    101 ATGATCATATCCTTGATGCCATCGTCAGCAAATCTGGAACGCATGTGTTA    150
                     |.||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27280___yr    101 ACGATCATATCCTTGATGCCATCGTCAGAAAATCTGGAACGCATGTGTTA    150

BSNT_03961___    151 GAATTTGGCCCTGGGACAGGGAATTTGACGGCTAAGCTGCTCGATGCAGG    200
                     |||||||||||.|||||.|||||||||||.||||||||||||||||||||
BSU27280___yr    151 GAATTTGGCCCGGGGACCGGGAATTTGACAGCTAAGCTGCTCGATGCAGG    200

BSNT_03961___    201 CAAAACTGTATTTGGAATCGAACCTTCTCCAGCAATGCGTAAACTGGCTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr    201 CAAAACTGTATTTGGAATCGAACCTTCTCCAGCAATGCGTAAACTGGCTT    250

BSNT_03961___    251 CTGACAAGCTTTCAGGCAGGTCGGAAATCGTTGATGGAGACTTCCTGACA    300
                     ||||||||||.|||||||||.|||||||||||||||||||||||||||||
BSU27280___yr    251 CTGACAAGCTCTCAGGCAGGACGGAAATCGTTGATGGAGACTTCCTGACA    300

BSNT_03961___    301 TTCCCTGAGCCGCCATTTCAGGCTGATACAATTGTCAGTTCATATGCTTT    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27280___yr    301 TTCCCTGAGCCGCCATTTCAGGCTGATACGATTGTCAGTTCATATGCTTT    350

BSNT_03961___    351 TCATCATTTGACTGACGAAGAAAAGCGGGCTGCCATAAAGCAATATGGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr    351 TCATCATTTGACTGACGAAGAAAAGCGGGCTGCCATAAAGCAATATGGCA    400

BSNT_03961___    401 AATACCTTCACTTGCATGATAAAATAGTGTTTGCCGATACCGTCTTTGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr    401 AATACCTTCACTTGCATGATAAAATAGTGTTTGCCGATACCGTCTTTGAA    450

BSNT_03961___    451 GATGCGCAAGCGTATCAAAAGGCTATCGATAAAGCCCGTTCTCAAGGCTT    500
                     .|||||||||||||||||.|||||||||||||||||||||||||||||||
BSU27280___yr    451 AATGCGCAAGCGTATCAACAGGCTATCGATAAAGCCCGTTCTCAAGGCTT    500

BSNT_03961___    501 TTATCAGCTTGCAAATGATTTAGAGACAGAGCATTATCCTACATTGGATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr    501 TTATCAGCTTGCAAATGATTTAGAGACAGAGCATTATCCTACATTGGATG    550

BSNT_03961___    551 CGTTGAAAGAAATGTTTACAGCTGAAGGTTTTGCAGTCCGATTCACTCAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr    551 CGTTGAAAGAAATGTTTACAGCTGAAGGTTTTGCAGTCCGATTCACTCAG    600

BSNT_03961___    601 CAAAACGACTTCGTGTGGATAATGGAGGCGATCAAACGGTAA    642
                     ||||||||||||||||||||||||||||||||||||||||||
BSU27280___yr    601 CAAAACGACTTCGTGTGGATAATGGAGGCGATCAAACGGTAA    642


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