Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03966 and BSU27320

See Amino acid alignment / Visit BSNT_03966 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:09
# Commandline: needle
#    -asequence dna-align/BSNT_03966___greA.1.22522.seq
#    -bsequence dna-align/BSU27320___greA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03966___greA-BSU27320___greA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03966___greA-BSU27320___greA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03966___greA
# 2: BSU27320___greA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:     473/474 (99.8%)
# Similarity:   473/474 (99.8%)
# Gaps:           0/474 ( 0.0%)
# Score: 2361.0
# 
#
#=======================================

BSNT_03966___      1 ATGGCACAAGAGAAAGTTTTTCCTATGACTGCAGAAGGAAAACAAAAACT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr      1 ATGGCACAAGAGAAAGTTTTTCCTATGACTGCAGAAGGAAAACAAAAACT     50

BSNT_03966___     51 TGAACAAGAATTAGAATATTTGAAAACGGTTAAACGAAAAGAAGTAGTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr     51 TGAACAAGAATTAGAATATTTGAAAACGGTTAAACGAAAAGAAGTAGTAG    100

BSNT_03966___    101 AGCGAATCAAAATTGCGAGAAGCTTCGGAGACCTTTCCGAGAACTCTGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr    101 AGCGAATCAAAATTGCGAGAAGCTTCGGAGACCTTTCCGAGAACTCTGAA    150

BSNT_03966___    151 TACGATTCAGCGAAAGAAGAGCAGGCATTTGTAGAGGGCCGCGTGACGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr    151 TACGATTCAGCGAAAGAAGAGCAGGCATTTGTAGAGGGCCGCGTGACGAC    200

BSNT_03966___    201 TCTTGAAAATATGATTCGCAATGCGAAAATCATTGAAGATGACGGCGGCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr    201 TCTTGAAAATATGATTCGCAATGCGAAAATCATTGAAGATGACGGCGGCT    250

BSNT_03966___    251 CTAACGTTGTCGGTTTGGGTAAAACCGTCACTTTCGTCGAACTGCCTGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr    251 CTAACGTTGTCGGTTTGGGTAAAACCGTCACTTTCGTCGAACTGCCTGAC    300

BSNT_03966___    301 GGTGATGAAGAATCATATACGATCGTCGGAAGCGCGGAAGCTGACCCGTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr    301 GGTGATGAAGAATCATATACGATCGTCGGAAGCGCGGAAGCTGACCCGTT    350

BSNT_03966___    351 TGAAGGGAAAATCTCAAACGATTCACCGATCGCAAAAAGCCTCTTGGGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27320___gr    351 TGAAGGGAAAATCTCAAACGATTCACCGATCGCAAAAAGCCTCTTGGGCA    400

BSNT_03966___    401 AAAAAGTAGATGAAGAAGTCACAGTACAAACACCGGGCGGAGAAATGCTT    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU27320___gr    401 AAAAAGTAGATGAAGAAGTCACAGTACAAACACCGGGCGGAGAAATGCTC    450

BSNT_03966___    451 GTGAAAATTGTGAAAATTTCATAA    474
                     ||||||||||||||||||||||||
BSU27320___gr    451 GTGAAAATTGTGAAAATTTCATAA    474


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