Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03976 and BSU27400

See Amino acid alignment / Visit BSNT_03976 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:10
# Commandline: needle
#    -asequence dna-align/BSNT_03976___yrzL.1.22522.seq
#    -bsequence dna-align/BSU27400___yrzL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03976___yrzL-BSU27400___yrzL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03976___yrzL-BSU27400___yrzL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03976___yrzL
# 2: BSU27400___yrzL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     265/267 (99.3%)
# Similarity:   265/267 (99.3%)
# Gaps:           0/267 ( 0.0%)
# Score: 1317.0
# 
#
#=======================================

BSNT_03976___      1 GTGAGCTCGTTTGATAAAACGATGAAATTTAATTTCTCCGATGATTCTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27400___yr      1 GTGAGCTCGTTTGATAAAACGATGAAATTTAATTTCTCCGATGATTCTGC     50

BSNT_03976___     51 TGAGACTAACGTAAATGAGGTGCTGATTACAGTGTATGACGCGCTTCAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27400___yr     51 TGAGACTAACGTAAATGAGGTGCTGATTACAGTGTATGACGCGCTTCAGG    100

BSNT_03976___    101 AAAAGGGCTACAATCCAATCAACCAAATTGTCGGGTACTTGCTGTCAGGT    150
                     |||||||||||||||||||||||||.||||||||.|||||||||||||||
BSU27400___yr    101 AAAAGGGCTACAATCCAATCAACCAGATTGTCGGATACTTGCTGTCAGGT    150

BSNT_03976___    151 GATCCCGCTTATATTCCTAGGCATCGTGACGCTCGCAATTTAATTCGCAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27400___yr    151 GATCCCGCTTATATTCCTAGGCATCGTGACGCTCGCAATTTAATTCGCAA    200

BSNT_03976___    201 ACTTGAAAGAGACGAATTAATCGAGGAATTGGTAAAGTCTTATTTAGAAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27400___yr    201 ACTTGAAAGAGACGAATTAATCGAGGAATTGGTAAAGTCTTATTTAGAAC    250

BSNT_03976___    251 AGCATAAAGAGGCGTAA    267
                     |||||||||||||||||
BSU27400___yr    251 AGCATAAAGAGGCGTAA    267


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