Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03977 and BSU27410

See Amino acid alignment / Visit BSNT_03977 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:11
# Commandline: needle
#    -asequence dna-align/BSNT_03977___alaS.1.22522.seq
#    -bsequence dna-align/BSU27410___alaS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03977___alaS-BSU27410___alaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03977___alaS-BSU27410___alaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03977___alaS
# 2: BSU27410___alaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2637
# Identity:    2618/2637 (99.3%)
# Similarity:  2618/2637 (99.3%)
# Gaps:           0/2637 ( 0.0%)
# Score: 13014.0
# 
#
#=======================================

BSNT_03977___      1 ATGAAACACTTAACTTCTGCGGAAGTGCGTCAAATGTTTTTGGATTTCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al      1 ATGAAACACTTAACTTCTGCGGAAGTGCGTCAAATGTTTTTGGATTTCTT     50

BSNT_03977___     51 TAAAGAAAAAGGACATGCGGTAGAGCCAAGCGCGTCATTAGTGCCTCATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al     51 TAAAGAAAAAGGACATGCGGTAGAGCCAAGCGCGTCATTAGTGCCTCATG    100

BSNT_03977___    101 AGGATCCTTCACTGCTTTGGATCAACAGCGGTGTTGCGACGCTGAAAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    101 AGGATCCTTCACTGCTTTGGATCAACAGCGGTGTTGCGACGCTGAAAAAA    150

BSNT_03977___    151 TATTTTGACGGCCGTGTCGTGCCGGAAAATCCAAGAATCGTAAACGCTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    151 TATTTTGACGGCCGTGTCGTGCCGGAAAATCCAAGAATCGTAAACGCTCA    200

BSNT_03977___    201 AAAAGCGATCAGAACAAACGATATAGAAAATGTAGGTAAAACTGCGCGGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU27410___al    201 AAAAGCGATCAGAACAAACGATATAGAAAATGTAGGTAAAACTGCGCGCC    250

BSNT_03977___    251 ATCACACTTTCTTTGAAATGCTCGGAAACTTTTCCATCGGCGATTATTTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    251 ATCACACTTTCTTTGAAATGCTCGGAAACTTTTCCATCGGCGATTATTTC    300

BSNT_03977___    301 AAAGAAGAAGCCATTACATGGGCTTGGGAGTTTTTAACGAGCGACAAGTG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    301 AAAGAAGAAGCCATTACATGGGCTTGGGAGTTTTTAACGAGCGACAAGTG    350

BSNT_03977___    351 GATTGGCTTCGACAAAGAGCTTCTCTCTGTTACGGTTCATCCTGAAGATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    351 GATTGGCTTCGACAAAGAGCTTCTCTCTGTTACGGTTCATCCTGAAGATG    400

BSNT_03977___    401 AAGAGGCATATGAGTTTTGGGCGAAAAAAATCGGTATTCCTGAAGAAAGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    401 AAGAGGCATATGAGTTTTGGGCGAAAAAAATCGGTATTCCTGAAGAAAGA    450

BSNT_03977___    451 ATTATCCGTCTGGAAGGGAACTTCTGGGATATCGGTGAAGGGCCGAGCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    451 ATTATCCGTCTGGAAGGGAACTTCTGGGATATCGGTGAAGGGCCGAGCGG    500

BSNT_03977___    501 ACCGAATACGGAAATCTTTTACGACCGCGGTGAAGCATACGGTAATGATC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    501 ACCGAATACGGAAATCTTTTACGACCGCGGTGAAGCATACGGTAATGATC    550

BSNT_03977___    551 CAGAAGATCCGGAGCTTTACCCAGGCGGAGAAAACGACCGTTACCTGGAA    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27410___al    551 CAGAAGATCCGGAGCTTTACCCAGGCGGGGAAAACGACCGTTACCTGGAA    600

BSNT_03977___    601 GTATGGAACCTTGTGTTCTCAGAGTTCAACCATAACCCTGACGGCACGTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    601 GTATGGAACCTTGTGTTCTCAGAGTTCAACCATAACCCTGACGGCACGTA    650

BSNT_03977___    651 CACACCGCTTCCGAAGAAAAACATTGATACAGGCATGGGTCTTGAAAGAA    700
                     ||||||||||||.||||||||.||||||||||||||||||||||||||||
BSU27410___al    651 CACACCGCTTCCAAAGAAAAATATTGATACAGGCATGGGTCTTGAAAGAA    700

BSNT_03977___    701 TGGTATCTGTCATCCAGAATGTTCCGACAAACTTTGACACCGATTTGTTT    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    701 TGGTGTCTGTCATCCAGAATGTTCCGACAAACTTTGACACCGATTTGTTT    750

BSNT_03977___    751 GTTCCGATCATTAAAGCAACAGAATCGATTTCTGGTGAAACATATGGCAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    751 GTTCCGATCATTAAAGCAACAGAATCGATTTCTGGTGAAACATATGGCAA    800

BSNT_03977___    801 AGACAATGTGAAAGACACTGCGTTTAAAGTGATTGCTGACCATATCAGAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    801 AGACAATGTGAAAGACACTGCGTTTAAAGTGATTGCTGACCATATCAGAA    850

BSNT_03977___    851 CGGTTGCCTTTGCTGTCAGTGACGGTGCGCTGCCGTCAAATGAAGGCCGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    851 CGGTTGCCTTTGCTGTCAGTGACGGTGCGCTGCCGTCAAATGAAGGCCGC    900

BSNT_03977___    901 GGCTATGTATTAAGACGCTTATTACGCCGTGCCGTGCGTTATGCCAAAAC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    901 GGCTATGTATTAAGACGCTTATTACGCCGTGCCGTGCGTTATGCCAAAAC    950

BSNT_03977___    951 GATCAACATCCATCGTCCGTTCATGTTTGATTTAGTGCCGGTTGTCGCAG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al    951 GATCAACATCCATCGTCCGTTCATGTTTGATTTAGTGCCGGTTGTCGCAG   1000

BSNT_03977___   1001 AAATCATGGCTGATTTCTATCCTGAAGTGAAAGAGAAAGCGGATTTCATC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1001 AAATCATGGCTGATTTCTATCCTGAAGTGAAAGAGAAAGCGGATTTCATC   1050

BSNT_03977___   1051 GCAAAAGTCATTAAAACCGAGGAAGAACGCTTCCATGAGACCCTTAATGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1051 GCAAAAGTCATTAAAACCGAGGAAGAACGCTTCCATGAGACCCTTAATGA   1100

BSNT_03977___   1101 AGGGCTTGCGATCCTGTCAGAAATGATCAAAAAAGAAAAAGACAAGGGCA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1101 AGGGCTTGCGATCCTGTCAGAAATGATCAAAAAAGAAAAAGACAAGGGCA   1150

BSNT_03977___   1151 GCAGCGTTATCTCAGGTGCTGATGTGTTTAAACTGTATGATACGTATGGA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1151 GCAGCGTTATCTCAGGTGCTGATGTGTTTAAACTGTATGATACGTATGGA   1200

BSNT_03977___   1201 TTCCCGGTTGAATTGACTGAAGAATACGCAGAAGACGAGAACATGACGGT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1201 TTCCCGGTTGAATTGACTGAAGAATACGCAGAAGACGAGAACATGACGGT   1250

BSNT_03977___   1251 TGACCATGAGGGCTTTGAGGAGGAAATGAACCAGCAGCGTGAACGGGCAA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1251 TGACCATGAGGGCTTTGAGGAGGAAATGAACCAGCAGCGTGAACGGGCAA   1300

BSNT_03977___   1301 GAAACGCCCGCCAGGATGTCGGCAGCATGCAGGTGCAGGGCGGCGCACTG   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1301 GAAACGCCCGCCAGGATGTCGGCAGCATGCAGGTGCAGGGCGGCGCACTG   1350

BSNT_03977___   1351 CGCGACGTGACCGATGAAAGCACATTTGTCGGCTACTCTCAAACCAAAGC   1400
                     |||||||||||.|.||||||||||||||||||||||||||||||||||||
BSU27410___al   1351 CGCGACGTGACAGTTGAAAGCACATTTGTCGGCTACTCTCAAACCAAAGC   1400

BSNT_03977___   1401 TGATGCCAATATCATTGTGCTTCTTCAGGACGGCCAATTAATCGAAGAGG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1401 TGATGCCAATATCATTGTGCTTCTTCAGGACGGCCAATTAATCGAAGAGG   1450

BSNT_03977___   1451 CTTATGAAGGAGAAAGCGTTCAAATCATTCTTGATGAAACACCGTTCTAT   1500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1451 CTCATGAAGGAGAAAGCGTTCAAATCATTCTTGATGAAACACCGTTCTAT   1500

BSNT_03977___   1501 GCAGAAAGCGGCGGCCAAATCGGGGATAAAGGCTATCTCCGAAGCGAGCA   1550
                     |||||||||||||||||||||||.||.|||||||||||||||||||||||
BSU27410___al   1501 GCAGAAAGCGGCGGCCAAATCGGCGACAAAGGCTATCTCCGAAGCGAGCA   1550

BSNT_03977___   1551 GGCAGTTGTAAGAATTAAAGATGTTCAAAAAGCGCCAAACGGCCAGCATG   1600
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU27410___al   1551 GGCAGTTGTAAGAATTAAAGATGTTCAAAAAGCGCCGAACGGCCAGCATG   1600

BSNT_03977___   1601 TGCATGAAGGTGTTGTGGAGAGCGGTACTGTTCAAAAAGGCCTGCATGTT   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1601 TGCATGAAGGTGTTGTGGAGAGCGGTACTGTTCAAAAAGGCCTGCATGTT   1650

BSNT_03977___   1651 ACGGCTGAAGTTGAAGACCATATGAGAAGCGGCGTCATTAAAAACCACAC   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1651 ACGGCTGAAGTTGAAGACCATATGAGAAGCGGCGTCATTAAAAACCACAC   1700

BSNT_03977___   1701 GGCAACGCATTTATTGCATCAGGCTCTAAAAGACGTTCTTGGAACTCATG   1750
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU27410___al   1701 GGCAACGCATTTATTGCATCAGGCTCTAAAAGATGTTCTTGGAACTCATG   1750

BSNT_03977___   1751 TCAATCAGGCTGGCTCTCTTGTAACGGAAAACCGTCTTCGTTTTGACTTC   1800
                     ||||||||||.|||||||||||||||||||||||.|||||||||||||||
BSU27410___al   1751 TCAATCAGGCGGGCTCTCTTGTAACGGAAAACCGCCTTCGTTTTGACTTC   1800

BSNT_03977___   1801 TCGCACTTTGGCCAAGTGACAAAAGAAGAGCTCGAACAAATTGAAAGAAT   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1801 TCGCACTTTGGCCAAGTGACAAAAGAAGAGCTCGAACAAATTGAAAGAAT   1850

BSNT_03977___   1851 CGTAAACGAAAAGATCTGGGCGAGCATTCCGGTCAGCATTGATTTGAAAC   1900
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27410___al   1851 CGTAAACGAAAAGATCTGGGCGAGCATCCCGGTCAGCATTGATTTGAAAC   1900

BSNT_03977___   1901 CGATCGCTGAAGCAAAAGAAATGGGTGCGATGGCACTGTTCGGCGAAAAA   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1901 CGATCGCTGAAGCAAAAGAAATGGGTGCGATGGCACTGTTCGGCGAAAAA   1950

BSNT_03977___   1951 TATGGCGATATTGTCCGTGTCGTTCAAGTTGGAGATTACAGCTTAGAGCT   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   1951 TATGGCGATATTGTCCGTGTCGTTCAAGTTGGAGATTACAGCTTAGAGCT   2000

BSNT_03977___   2001 GTGCGGCGGCTGCCATGTCAGAAATACAGCAGAAATCGGCTTGTTTAAAA   2050
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27410___al   2001 GTGCGGCGGCTGCCACGTCAGAAATACAGCAGAAATCGGCTTGTTTAAAA   2050

BSNT_03977___   2051 TCGTTTCTGAATCCGGAATCGGAGCAGGCACAAGACGGATTGAAGCTGTA   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2051 TCGTTTCTGAATCCGGAATCGGAGCAGGCACAAGACGGATTGAAGCTGTA   2100

BSNT_03977___   2101 ACGGGACAAGGCGCTTACGTCGAAATGAACAGCCAGATTTCTGTATTGAA   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2101 ACGGGACAAGGCGCTTACGTCGAAATGAACAGCCAGATTTCTGTATTGAA   2150

BSNT_03977___   2151 GCAGACCGCTGACGAGCTGAAAACAAATATCAAAGAAGTGCCGAAACGGG   2200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2151 GCAGACCGCTGACGAGCTGAAAACAAATATCAAAGAAGTGCCGAAACGGG   2200

BSNT_03977___   2201 TTGCGGCTCTGCAGGCTGAACTGAAGGAAGCACAAAGAGAAAATGAATCT   2250
                     |.||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27410___al   2201 TCGCGGCTCTGCAGGCTGAACTGAAGGATGCACAAAGAGAAAATGAATCT   2250

BSNT_03977___   2251 CTTCTTGCAAAACTAGGCAACGTGGAAGCAGGAGCAATCCTGTCGAAAGT   2300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2251 CTTCTTGCAAAACTAGGCAACGTGGAAGCAGGAGCAATCCTGTCGAAAGT   2300

BSNT_03977___   2301 AAAAGAAGTTGACGGCGTAAACGTGCTTGCGGCAAAAGTAAATGCAAAAG   2350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2301 AAAAGAAGTTGACGGCGTAAACGTGCTTGCGGCAAAAGTAAATGCAAAAG   2350

BSNT_03977___   2351 ACATGAATCATCTCCGCACTATGGTCGATGAACTCAAAGCAAAGCTTGGC   2400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2351 ACATGAATCATCTCCGCACTATGGTCGATGAACTCAAAGCAAAGCTTGGC   2400

BSNT_03977___   2401 TCTGCGGTGATCGTGCTTGGTGCGGTACAAAACGATAAAGTTAATATCTC   2450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2401 TCTGCGGTGATCGTGCTTGGTGCGGTACAAAACGATAAAGTTAATATCTC   2450

BSNT_03977___   2451 TGCCGGAGTCACAAAGGACCTCATTGAGAAAGGCCTTCACGCCGGCAAGC   2500
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU27410___al   2451 TGCCGGAGTCACAAAGGACCTCATTGAGAAAGGACTTCACGCCGGCAAGC   2500

BSNT_03977___   2501 TGGTTAAACAAGCTGCGGAAGTTTGCGGCGGAGGCGGCGGAGGCCGTCCG   2550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2501 TGGTTAAACAAGCTGCGGAAGTTTGCGGCGGAGGCGGCGGAGGCCGTCCG   2550

BSNT_03977___   2551 GACATGGCGCAGGCAGGCGGTAAACAGCCGGAAAAATTAGAAGAAGCTTT   2600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27410___al   2551 GACATGGCGCAGGCAGGCGGTAAACAGCCGGAAAAATTAGAAGAAGCTTT   2600

BSNT_03977___   2601 GGCTTCTGTAGAAGATTGGGTGAAATCCGTTTTATAA   2637
                     |||||||||||||||||||||||||||||||||||||
BSU27410___al   2601 GGCTTCTGTAGAAGATTGGGTGAAATCCGTTTTATAA   2637


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