Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03992 and BSU27500

See Amino acid alignment / Visit BSNT_03992 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence dna-align/BSNT_03992___trmU.1.22522.seq
#    -bsequence dna-align/BSU27500___trmU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03992___trmU-BSU27500___trmU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03992___trmU-BSU27500___trmU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03992___trmU
# 2: BSU27500___trmU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity:    1110/1116 (99.5%)
# Similarity:  1110/1116 (99.5%)
# Gaps:           0/1116 ( 0.0%)
# Score: 5526.0
# 
#
#=======================================

BSNT_03992___      1 ATGGAAAAACGGCCGGAGGATACAAGAGTCGTCGTCGGCATGTCCGGCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr      1 ATGGAAAAACGGCCGGAGGATACAAGAGTCGTCGTCGGCATGTCCGGCGG     50

BSNT_03992___     51 AGTAGACTCATCTGTGGCGGCCCTGCTGTTAAAAGAACAGGGCTATGATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr     51 AGTAGACTCATCTGTGGCGGCCCTGCTGTTAAAAGAACAGGGCTATGATG    100

BSNT_03992___    101 TAATCGGAATCTTTATGAAAAACTGGGATGATACGGACGAAAACGGTTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    101 TAATCGGAATCTTTATGAAAAACTGGGATGATACGGACGAAAACGGTTTT    150

BSNT_03992___    151 TGCACGGCGACAGAGGATTATGAAGATGTGATCCGCGTCTGCAACCAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    151 TGCACGGCGACAGAGGATTATGAAGATGTGATCCGCGTCTGCAACCAAAT    200

BSNT_03992___    201 CGGAATTCCGTATTATGCCGTAAACTTTGAAAAGCAATATTATGAGAAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    201 CGGAATTCCGTATTATGCCGTAAACTTTGAAAAGCAATATTATGAGAAGG    250

BSNT_03992___    251 TATTTCAATACTTCCTTGATGAATATAAAGCAGGCAGAACACCAAACCCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    251 TATTTCAATACTTCCTTGATGAATATAAAGCAGGCAGAACACCAAACCCG    300

BSNT_03992___    301 GATGTATTGTGCAACAAAGAAATTAAATTCAAGGCCTTTTTGGAGCATGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    301 GATGTATTGTGCAACAAAGAAATTAAATTCAAGGCCTTTTTGGAGCATGC    350

BSNT_03992___    351 ATTGTCACTTGGCGCCGACTATTTAGCGACTGGCCACTATGCAAGAGTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    351 ATTGTCACTTGGCGCCGACTATTTAGCGACTGGCCACTATGCAAGAGTAG    400

BSNT_03992___    401 ACAGAAGCGGCGAAAAAGTCAGAATGCTGCGCGGCATTGATGAAAACAAG    450
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU27500___tr    401 ACAGAAGCGGCGGAAAAGTCAGAATGCTGCGCGGCATTGATGAAAACAAG    450

BSNT_03992___    451 GATCAAACGTACTTCTTGAATCAGCTGACAGAAGATACGCTGAGCAAAGT    500
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU27500___tr    451 GATCAAACGTACTTCCTGAATCAGCTGACAGAAGATACGCTGAGCAAAGT    500

BSNT_03992___    501 CATGTTCCCGATCGGCGAACTTCAAAAAAGCCGTGTGCGTGAAATCGCCA    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU27500___tr    501 CATGTTCCCGATCGGCGAACTTCAAAAAAGCCGTGTGCGTGAAATTGCCA    550

BSNT_03992___    551 AAGAAGCAGAACTTGCAACGGCGACGAAAAAAGACAGTACAGGCATCTGC    600
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU27500___tr    551 AAGAAGCAGAACTTGCAACAGCGACGAAAAAAGACAGTACAGGCATCTGC    600

BSNT_03992___    601 TTTATCGGCGAACGCAACTTCAAAACGTTTCTCAGCCAATATCTCCCTGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    601 TTTATCGGCGAACGCAACTTCAAAACGTTTCTCAGCCAATATCTCCCTGC    650

BSNT_03992___    651 ACAGCCGGGCGATATGATGACGATGGACGGCGAAGTAAAAGGCCGCCACG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    651 ACAGCCGGGCGATATGATGACGATGGACGGCGAAGTAAAAGGCCGCCACG    700

BSNT_03992___    701 ACGGGTTGATGTACTATACGATCGGACAGCGTCACGGCCTTGGCATCGGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    701 ACGGGTTGATGTACTATACGATCGGACAGCGTCACGGCCTTGGCATCGGC    750

BSNT_03992___    751 GGAAGCGGCGAGCCGTGGTTTGCGGTAGGGAAAGATCTTGAAAAGAACAT    800
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27500___tr    751 GGAAGCGGCGAGCCGTGGTTTGCGGTAGGCAAAGATCTTGAAAAGAACAT    800

BSNT_03992___    801 CCTCTACGTAGATCAAGGGTTCCATAACCCTCTTTTATATTCCGACAAAA    850
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU27500___tr    801 CCTCTACGTAGATCAAGGGTTCCATAACCCGCTTTTATATTCCGACAAAA    850

BSNT_03992___    851 TCACAGCAACAAATATCAGCTGGGTACGTTCGGATATCATGAAGGGCGAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    851 TCACAGCAACAAATATCAGCTGGGTACGTTCGGATATCATGAAGGGCGAA    900

BSNT_03992___    901 GAGATTTCCTGCACGGCTAAATTCCGTTACCGCCAAGAGGATCATAAAGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    901 GAGATTTCCTGCACGGCTAAATTCCGTTACCGCCAAGAGGATCATAAAGT    950

BSNT_03992___    951 AACAGTGCGCATGACTGGCGAAGGTGAAGCGGAAGTCATCTTTGATGAAC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr    951 AACAGTGCGCATGACTGGCGAAGGTGAAGCGGAAGTCATCTTTGATGAAC   1000

BSNT_03992___   1001 AAGTCCGCGCTGTAACGCCGGGACAAGCCGTTGTCTTCTATGACGGCGAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr   1001 AAGTCCGCGCTGTAACGCCGGGACAAGCCGTTGTCTTCTATGACGGCGAA   1050

BSNT_03992___   1051 GAATGCCTTGGCGGCGGGACAATTGATGATGTGTACAAAGACGGAACAAA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27500___tr   1051 GAATGCCTTGGCGGCGGGACAATTGATGATGTGTACAAAGACGGAACAAA   1100

BSNT_03992___   1101 ATTGTGGTACGTATAA   1116
                     ||||||||||||||||
BSU27500___tr   1101 ATTGTGGTACGTATAA   1116


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