Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03996 and BSU27530

See Amino acid alignment / Visit BSNT_03996 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence dna-align/BSNT_03996___rarA.1.22522.seq
#    -bsequence dna-align/BSU27530___yrvN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03996___rarA-BSU27530___yrvN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03996___rarA-BSU27530___yrvN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03996___rarA
# 2: BSU27530___yrvN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1266
# Identity:    1254/1266 (99.1%)
# Similarity:  1254/1266 (99.1%)
# Gaps:           0/1266 ( 0.0%)
# Score: 6222.0
# 
#
#=======================================

BSNT_03996___      1 ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr      1 ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTAT     50

BSNT_03996___     51 CGGCCAGCAGCATCTGGTGGCTGAAGATAAAATTATTGGCAGAATGGTCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr     51 CGGCCAGCAGCATCTGGTGGCTGAAGATAAAATTATTGGCAGAATGGTCC    100

BSNT_03996___    101 AGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    101 AGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGA    150

BSNT_03996___    151 AAAACATCAATCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    151 AAAACATCAATCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCG    200

BSNT_03996___    201 AAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAAATCGTAGCTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    201 AAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAAATCGTAGCTC    250

BSNT_03996___    251 AGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    251 AGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCAC    300

BSNT_03996___    301 AGGCTGGATAAAGGAAAACAGGATTTTCTATTACCCTATTTAGAAAACGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    301 AGGCTGGATAAAGGAAAACAGGATTTTCTATTACCCTATTTAGAAAACGG    350

BSNT_03996___    351 GATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    351 AATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA    400

BSNT_03996___    401 ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    401 ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACA    450

BSNT_03996___    451 CCTGATCTGATTAAACAGGCACTGGAACGCGCGCTCCATGATGAGCATCG    500
                     |||||.|||||||||||||||||||||||.||||||||||||||||||||
BSU27530___yr    451 CCTGAACTGATTAAACAGGCACTGGAACGTGCGCTCCATGATGAGCATCG    500

BSNT_03996___    501 GGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    501 GGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATT    550

BSNT_03996___    551 TTGCCCACGGATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    551 TTGCCCACGGATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAG    600

BSNT_03996___    601 CTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAATTCACATTAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    601 CTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAATTCACATTAC    650

BSNT_03996___    651 ATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    651 ATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATA    700

BSNT_03996___    701 AAGATGGTGACGCGCATTATGATGTACTGTCCGCTTTTCAAAAATCGATC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU27530___yr    701 AAGATGGTGACGCGCATTATGATGTACTGTCCGCTTTTCAAAAATCAATC    750

BSNT_03996___    751 CGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    751 CGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA    800

BSNT_03996___    801 AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    801 AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATG    850

BSNT_03996___    851 AAGATATCGGTTTAGCAAGCCCGCAAGCCGGCCCTAGAGTGCTGAACGCT    900
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    851 AGGATATCGGTTTAGCAAGCCCGCAAGCCGGCCCTAGAGTGCTGAACGCT    900

BSNT_03996___    901 ATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    901 ATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGC    950

BSNT_03996___    951 CAACGCAGTTATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr    951 CAACGCAGTTATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTC   1000

BSNT_03996___   1001 TGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAAAATTGGTGAT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU27530___yr   1001 TGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAAAATTGGGGAT   1050

BSNT_03996___   1051 GTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr   1051 GTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGG   1100

BSNT_03996___   1101 AAGAGGAATCGACTATAAATACCCGCACAATTACGACAGCGGTTGGGTCG   1150
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU27530___yr   1101 AAGAGGAATCGACTATAAATACCCGCACAATTACGACAACGGTTGGGTCG   1150

BSNT_03996___   1151 AACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG   1200
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU27530___yr   1151 AACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG   1200

BSNT_03996___   1201 AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATT   1250
                     ||||||||.|||||.||||||||.|||||||||||||||||.||||||||
BSU27530___yr   1201 AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATT   1250

BSNT_03996___   1251 AATGAAAAGAAAATAA   1266
                     ||||||||||||||||
BSU27530___yr   1251 AATGAAAAGAAAATAA   1266


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