Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_03999 and BSU27550

See Amino acid alignment / Visit BSNT_03999 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence dna-align/BSNT_03999___aspS.1.22522.seq
#    -bsequence dna-align/BSU27550___aspS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03999___aspS-BSU27550___aspS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03999___aspS-BSU27550___aspS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03999___aspS
# 2: BSU27550___aspS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1779
# Identity:    1703/1779 (95.7%)
# Similarity:  1703/1779 (95.7%)
# Gaps:           0/1779 ( 0.0%)
# Score: 8211.0
# 
#
#=======================================

BSNT_03999___      1 TTGTTTGGAAGAACATATTATTGCGGTGATATAACTGAAAAAGCAATTGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as      1 TTGTTTGGAAGAACATATTATTGCGGTGATATAACTGAAAAAGCAATTGG     50

BSNT_03999___     51 CGAATCTGTAACGCTGAAAGGCTGGGTCCAAAAAAGACGAGACCTCGGCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as     51 CGAATCTGTAACGCTGAAAGGCTGGGTCCAAAAAAGACGAGACCTCGGCG    100

BSNT_03999___    101 GATTGATTTTTATTGACTTGCGTGACCGTACGGGAATTGTTCAAGTCGTT    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU27550___as    101 GATTGATTTTTATTGACTTGCGTGACCGTACGGGCATTGTTCAAGTCGTT    150

BSNT_03999___    151 TTCAACCCCGATGTGTCAAAAGAAGCGCTTGCTGTTGCGGAAGGCATCAG    200
                     ||.|||||.||||||||||||||||||||||||.||||||||||||||||
BSU27550___as    151 TTTAACCCTGATGTGTCAAAAGAAGCGCTTGCTATTGCGGAAGGCATCAG    200

BSNT_03999___    201 AAATGAATACGTGCTTGATGTTCAAGGAAAAGTAGTGGCGCGGGAAGAAG    250
                     |||||||||||||||||||.|||||||||||||.||||||||.|||||.|
BSU27550___as    201 AAATGAATACGTGCTTGATATTCAAGGAAAAGTGGTGGCGCGTGAAGAGG    250

BSNT_03999___    251 GAACAGTCAATCCGAATTTGAAGACAGGTGCGATCGAAATTCACGCTAAC    300
                     |||||||.||||||||||||||.|||||.|||||||||||.||.|||.|.
BSU27550___as    251 GAACAGTTAATCCGAATTTGAAAACAGGCGCGATCGAAATACATGCTGAT    300

BSNT_03999___    301 GGAGTGACAGTACTAAGTGCTGCAAAGACGCCTCCATTTGCGATTTCTGA    350
                     |||||||..|||.|||.||||||||||||.||||||||||||||||||||
BSU27550___as    301 GGAGTGAACGTATTAAATGCTGCAAAGACACCTCCATTTGCGATTTCTGA    350

BSNT_03999___    351 TCAAGCAGAAGAAGTGTCAGAGGACGTTCGTTTAAAACACCGTTACTTAG    400
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU27550___as    351 TCAAGCTGAAGAAGTGTCAGAGGACGTTCGTTTAAAACACCGTTACTTAG    400

BSNT_03999___    401 ATTTGCGCAGACCGGCTATGTTTCAAACGATGCAGATGCGTCATAATGTG    450
                     ||||||||||||||||||||||.||.|||||||||.||||.|||||.|||
BSU27550___as    401 ATTTGCGCAGACCGGCTATGTTCCAGACGATGCAGCTGCGCCATAACGTG    450

BSNT_03999___    451 ACGAAAGCTGTCCGCAGCTTTTTAGATGAAAACGGGTTTCTTGATATTGA    500
                     |||||||||||.||||||||||||||||||||.|||||||||||||||||
BSU27550___as    451 ACGAAAGCTGTTCGCAGCTTTTTAGATGAAAATGGGTTTCTTGATATTGA    500

BSNT_03999___    501 AACGCCGATTTTAACAAAAAGCACGCCTGAAGGCGCACGTGACTACTTGG    550
                     ||||||||||||||||..||||||||||||||||||||||||||||||||
BSU27550___as    501 AACGCCGATTTTAACAGGAAGCACGCCTGAAGGCGCACGTGACTACTTGG    550

BSNT_03999___    551 TGCCGAGCCGTGTGCACGAAGGTGAGTTCTACGCGCTGCCGCAGTCTCCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as    551 TGCCGAGCCGTGTGCACGAAGGTGAGTTCTACGCGCTGCCGCAGTCTCCG    600

BSNT_03999___    601 CAGCTATTTAAACAGCTTCTGATGGTATCAGGCATTGAACGGTATTATCA    650
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU27550___as    601 CAGCTATTTAAACAGCTTCTGATGGTATCAGGCATTGAACGATATTATCA    650

BSNT_03999___    651 GATTGCCCGCTGTTTCCGTGATGAAGACTTGCGTGCGGACCGCCAGCCTG    700
                     .|||||||||||||||||.|||||||||||||||||||||||.|||||||
BSU27550___as    651 AATTGCCCGCTGTTTCCGCGATGAAGACTTGCGTGCGGACCGTCAGCCTG    700

BSNT_03999___    701 AGTTCACGCAAATTGATATTGAAATGTCCTTTATGAGCCAGGAAGACATT    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as    701 AGTTTACGCAAATTGATATTGAAATGTCCTTTATGAGCCAGGAAGACATT    750

BSNT_03999___    751 ATGTCATTGGCTGAGGATATGATGGCAAAGATTATGCGTGAAACAAAAGG    800
                     |||||||||||||||||.||||||||||||.|||||||||||||||||||
BSU27550___as    751 ATGTCATTGGCTGAGGAGATGATGGCAAAGGTTATGCGTGAAACAAAAGG    800

BSNT_03999___    801 CGTGGAAATTAAGCTTCCTCTTCCCAGAATGACGTATGACGAAGCAATGA    850
                     .|.||||.||.|||||||||||||..||||||||||||||||||||||||
BSU27550___as    801 TGAGGAACTTCAGCTTCCTCTTCCTCGAATGACGTATGACGAAGCAATGA    850

BSNT_03999___    851 ACAAGTACGGTTCTGATAAACCGGATACGCGTTTTGACATGCTTTTGACA    900
                     ||||||||||.||||||||||||||||||||||||||||||||||||||.
BSU27550___as    851 ACAAGTACGGGTCTGATAAACCGGATACGCGTTTTGACATGCTTTTGACG    900

BSNT_03999___    901 GATGTGTCTGACATTGTGAAGGATACGGAATTTAAAGTATTCTCATCAGC    950
                     |||||||||||||||||.||||||||||||||||||||.|||||||||||
BSU27550___as    901 GATGTGTCTGACATTGTAAAGGATACGGAATTTAAAGTGTTCTCATCAGC    950

BSNT_03999___    951 TGTAGCAAACGGCGGTGTGGTCAAAGCCATCAACGTAAAAGGCGGTGCCG   1000
                     |||||||||||||||.|||||||||||||||||.||||||||||||||||
BSU27550___as    951 TGTAGCAAACGGCGGCGTGGTCAAAGCCATCAATGTAAAAGGCGGTGCCG   1000

BSNT_03999___   1001 GCGATTACTCCAGAAAAGACATCGATGCTCTTGGCGCTTTTGCTGCAAAC   1050
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU27550___as   1001 GCGATTACTCCAGAAAAGACATCGACGCTCTTGGCGCTTTTGCTGCAAAC   1050

BSNT_03999___   1051 TATGGGGCGAAAGGACTTGCCTGGGTGAAAGTTGAAGCAGACGGAGTGAA   1100
                     ||.|||||.|||||.||||||||||||||.|||||.||||||||||||||
BSU27550___as   1051 TACGGGGCAAAAGGGCTTGCCTGGGTGAAGGTTGAGGCAGACGGAGTGAA   1100

BSNT_03999___   1101 AGGACCGATCGCTAAATTCTTTGATGAAGAAAAGCAGTCTAAGCTGATTG   1150
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as   1101 AGGCCCGATCGCTAAATTCTTTGATGAAGAAAAGCAGTCTAAGCTGATTG   1150

BSNT_03999___   1151 AAGCACTTGATGCTGCTGAAGGTGATTTGTTGCTGTTCGGAGCGGATCAA   1200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU27550___as   1151 AAGCACTTGATGCTGCTGAAGGTGATTTGCTGCTGTTCGGAGCGGATCAA   1200

BSNT_03999___   1201 TTTGAAGTTGTGGCCGCATCACTCGGCGCGCTGCGTTTAAAGCTTGGGAA   1250
                     ||.||||||||||||||||||||||||||.|||||.||||||||||||||
BSU27550___as   1201 TTCGAAGTTGTGGCCGCATCACTCGGCGCCCTGCGCTTAAAGCTTGGGAA   1250

BSNT_03999___   1251 AGAGCGCGGGCTGATTGACGAAAACCTGTTCAATTTCTTATGGGTCATTG   1300
                     |||.|||||.||||||||||||||..||||||||||||||||||||||.|
BSU27550___as   1251 AGAACGCGGACTGATTGACGAAAAATTGTTCAATTTCTTATGGGTCATCG   1300

BSNT_03999___   1301 ACTGGCCGCTATTAGAGCATGATCCTGAGGAAGGCCGTTTCTACGCAGCG   1350
                     |||||||||||||||||||||||||.||.|||||||||||.|||||||||
BSU27550___as   1301 ACTGGCCGCTATTAGAGCATGATCCGGAAGAAGGCCGTTTTTACGCAGCG   1350

BSNT_03999___   1351 CACCATCCGTTCACAATGCCTGTCCGGGAAGACCTTGAGCTGATTGAAAC   1400
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU27550___as   1351 CACCATCCGTTCACAATGCCTGTCCGAGAAGACCTTGAGCTGATTGAAAC   1400

BSNT_03999___   1401 AGCGCCTGAAGACATGAAAGCACAAGCTTATGACCTCGTCTTAAACGGCT   1450
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU27550___as   1401 AGCGCCTGAAGACATGAAAGCGCAAGCTTATGACCTCGTCTTAAACGGCT   1450

BSNT_03999___   1451 ATGAGCTTGGCGGCGGTTCAATCCGTATTTTCGAAAAGGATATTCAGGAA   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as   1451 ATGAGCTTGGCGGCGGTTCAATCCGTATTTTCGAAAAGGATATTCAGGAA   1500

BSNT_03999___   1501 AAAATGTTTGCGCTTCTCGGCTTCTCACCAGAAGAAGCGGCTGAACAGTT   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as   1501 AAAATGTTTGCGCTTCTCGGCTTCTCACCAGAAGAAGCGGCTGAACAGTT   1550

BSNT_03999___   1551 CGGATTCCTGCTGGAAGCATTTGAATACGGCGCTCCTCCGCACGGCGGAA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as   1551 CGGATTCCTGCTGGAAGCATTTGAATACGGCGCTCCTCCGCACGGCGGAA   1600

BSNT_03999___   1601 TCGCACTTGGCTTAGACCGTCTCGTTATGCTTCTCGCAGGACGTACGAAC   1650
                     |||||||.|||||||||||||||||||||||||||||.||||||||||||
BSU27550___as   1601 TCGCACTCGGCTTAGACCGTCTCGTTATGCTTCTCGCTGGACGTACGAAC   1650

BSNT_03999___   1651 CTGAGAGATACGATTGCATTCCCGAAAACGGCAAGTGCAAGCTGCCTGAT   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27550___as   1651 CTGAGAGATACGATTGCATTCCCGAAAACGGCAAGTGCAAGCTGCCTGAT   1700

BSNT_03999___   1701 GACAGAGGCGCCTGGAGAAGTAAGCGACGCTCAGCTTGACGAGCTTCATC   1750
                     ||||||.|||||.||.||||||||||||||.|||||||||||||||||||
BSU27550___as   1701 GACAGAAGCGCCAGGCGAAGTAAGCGACGCCCAGCTTGACGAGCTTCATC   1750

BSNT_03999___   1751 TTTCTATCAAGAAAAAAGTTAAGAACTGA   1779
                     |||||||||||||||||||||||||||||
BSU27550___as   1751 TTTCTATCAAGAAAAAAGTTAAGAACTGA   1779


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.