Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04007 and BSU27620

See Amino acid alignment / Visit BSNT_04007 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:16
# Commandline: needle
#    -asequence dna-align/BSNT_04007___yrvE.1.22522.seq
#    -bsequence dna-align/BSU27620___recJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04007___yrvE-BSU27620___recJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04007___yrvE-BSU27620___recJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04007___yrvE
# 2: BSU27620___recJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2361
# Identity:    2343/2361 (99.2%)
# Similarity:  2343/2361 (99.2%)
# Gaps:           0/2361 ( 0.0%)
# Score: 11643.0
# 
#
#=======================================

BSNT_04007___      1 ATGTTAGCGTCAAAAATGCGATGGGAAATCCAGCGACCAGATCAGGATAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re      1 ATGTTAGCGTCAAAAATGCGATGGGAAATCCAGCGACCAGATCAGGATAA     50

BSNT_04007___     51 GGTCAAATCACTCACAGAACAATTGCATATAACACCTCTTGTTGCGTCCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re     51 GGTCAAATCACTCACAGAACAATTGCATATAACACCTCTTGTTGCGTCCC    100

BSNT_04007___    101 TGCTTGTAAAAAGAGGCTTTGATACGGCAGAAAGCGCTAGGCTGTTTTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    101 TGCTTGTAAAAAGAGGCTTTGATACGGCAGAAAGCGCTAGGCTGTTTTTA    150

BSNT_04007___    151 CATACAAAGGATGCCGATTTTTATGATCCTTTTGAAATGAAAGGCATGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    151 CATACAAAGGATGCCGATTTTTATGATCCTTTTGAAATGAAAGGCATGAA    200

BSNT_04007___    201 AGAAGCGGCAGATCGAATAAAACAGGCGATTTCACAACAAGAAAAGATTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    201 AGAAGCGGCAGATCGAATAAAACAGGCGATTTCACAACAAGAAAAGATTA    250

BSNT_04007___    251 TGATATATGGCGATTATGACGCCGATGGGGTTACAAGTACGTCAGTAATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU27620___re    251 TGATATATGGCGATTATGACGCCGATGGGGTTACAAGTACGTCAGTGATG    300

BSNT_04007___    301 CTTCACACGCTGCAAAAACTGTCGGCTCAAGTTGATTTTTATATACCTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    301 CTTCACACGCTGCAAAAACTGTCGGCTCAAGTTGATTTTTATATACCTGA    350

BSNT_04007___    351 CCGTTTTAAAGAAGGATATGGACCTAATGAACAGGCGTTTCGTTCGATTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    351 CCGTTTTAAAGAAGGATATGGACCTAATGAACAGGCGTTTCGTTCGATTA    400

BSNT_04007___    401 AAGATCGGGGCTTCTCTTTGATCATTACGGTTGATACAGGAATTGCCGCT    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    401 AAGAACGGGGCTTCTCTTTGATCATTACGGTTGATACAGGAATTGCCGCT    450

BSNT_04007___    451 GTGCATGAAGCGAAGGTGGCAAAGGAACTCGGACTGGATGTCATCATTAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    451 GTGCATGAAGCGAAGGTGGCAAAGGAACTCGGACTGGATGTCATCATTAC    500

BSNT_04007___    501 TGATCATCATGAACCGGGACCGGAGCTTCCGGATGTCCATGCGATCGTCC    550
                     .|||||||||||||||||||||||||||||||||||||.|||||||||||
BSU27620___re    501 CGATCATCATGAACCGGGACCGGAGCTTCCGGATGTCCGTGCGATCGTCC    550

BSNT_04007___    551 ACCCGAAGCAGCCTGGCTGCACTTACCCGTTTAAAGAGCTTGCCGGGGTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    551 ACCCGAAGCAGCCTGGCTGCACTTACCCGTTTAAAGAGCTTGCCGGGGTT    600

BSNT_04007___    601 GGAGTCGCGTTTAAGCTTGCCCACGCTTTATTGGGTGAACTTCCTGATGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    601 GGAGTCGCGTTTAAGCTTGCCCACGCTTTATTGGGTGAACTTCCTGATGA    650

BSNT_04007___    651 ACTGCTTGACCTGGCGGCTATCGGCACCATTGCCGATCTAGTCCCGCTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    651 ACTGCTTGACCTGGCGGCTATCGGCACCATTGCCGATCTAGTCCCGCTGC    700

BSNT_04007___    701 ATGACGAAAACAGATTAATTGCAACACTAGGACTTGAAAGGCTTCGACGG    750
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU27620___re    701 ATGACGAAAACAGATTAATAGCAACACTAGGACTTGAAAGGCTTCGACGG    750

BSNT_04007___    751 ACAAATCGGCTCGGCTTAAAAGAGCTGATTAAGCTGTCAGGCGGAGACAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    751 ACAAATCGGCTCGGCTTAAAAGAGCTGATTAAGCTGTCAGGCGGAGACAT    800

BSNT_04007___    801 CGGAGAAGCGAACGAAGAAACAGTCGGATTTCAGCTCGCACCAAGGCTGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    801 CGGAGAAGCGAACGAAGAAACAGTCGGATTTCAGCTCGCACCAAGGCTGA    850

BSNT_04007___    851 ATGCCGTCGGAAGAATCGAACAGGCGGATCCCGCTGTTCATTTGCTTATG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    851 ATGCCGTCGGAAGAATCGAACAGGCGGATCCCGCTGTTCATTTGCTTATG    900

BSNT_04007___    901 TCAGAGGATTCGTTTGAAGCGGAAGAGCTTGCCGCAGAAATTGACCAGCT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    901 TCAGAGGATTCGTTTGAAGCGGAAGAGCTTGCCGCAGAAATTGACCAGCT    950

BSNT_04007___    951 GAACAAAGAGCGCCAAAAAATGGTCAGCAAAATGACGGATGAAGCGATTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re    951 GAACAAAGAGCGCCAAAAAATGGTCAGCAAAATGACGGATGAAGCGATTG   1000

BSNT_04007___   1001 AAATGGTTGAACAGCAAGGGCTCGATCAAACTGCAATTGTCGTGGCCAAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1001 AAATGGTTGAACAGCAAGGGCTCGATCAAACTGCAATTGTCGTGGCCAAA   1050

BSNT_04007___   1051 GCCGGATGGAACCCGGGAGTCGTCGGGATTGTGGCTTCAAAGCTTGTGGA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1051 GCCGGATGGAACCCGGGAGTCGTCGGGATTGTGGCTTCAAAGCTTGTGGA   1100

BSNT_04007___   1101 CCGCTTCTACCGACCGGCCATTGTTCTTGGCATTGATGAAGAAAAGGGAA   1150
                     |||.||||||||||||||||||||||||||.|||||||||||||||||||
BSU27620___re   1101 CCGTTTCTACCGACCGGCCATTGTTCTTGGTATTGATGAAGAAAAGGGAA   1150

BSNT_04007___   1151 TCGCTAAAGGTTCGGCCCGAAGCATCAGAGGCTTTAATTTATTTGAGAGC   1200
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU27620___re   1151 TCGCTAAAGGTTCGGCCCGAAGCATCAGAGGATTTAATTTATTTGAGAGC   1200

BSNT_04007___   1201 CTTTCTGAATGCAGAGATATTCTTCCTCATTTCGGCGGCCATCCAATGGC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1201 CTTTCTGAATGCAGAGATATTCTTCCTCATTTCGGCGGCCATCCAATGGC   1250

BSNT_04007___   1251 TGCGGGGATGACGCTGAAAGCTGAAGATGTGCCGGATTTGCGAAGCAGGC   1300
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU27620___re   1251 TGCGGGGATGACGCTGAAAGCCGAAGATGTGCCGGATTTGCGAAGCAGGC   1300

BSNT_04007___   1301 TGAACGAAATAGCGGACAATACGCTTACGGAAGAGGATTTTATTCCCGTA   1350
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1301 TGAATGAAATAGCGGACAATACGCTTACGGAAGAGGATTTTATTCCCGTA   1350

BSNT_04007___   1351 CAGGAAGTCGACCTTGTCTGCAGCATCGAGGACATTACAGTTGAAAGCAT   1400
                     |||||||||||||||||||||.||.||||.||||||||||||||||||||
BSU27620___re   1351 CAGGAAGTCGACCTTGTCTGCGGCGTCGAAGACATTACAGTTGAAAGCAT   1400

BSNT_04007___   1401 CGCAGAAATGAACATGCTGTCTCCTTTTGGCATGCTTAACCCGAAACCGC   1450
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU27620___re   1401 CGCAGAAATGAACATGCTGTCTCCTTTTGGCATGCTGAACCCGAAACCGC   1450

BSNT_04007___   1451 ACGTTCTCGTAGAAAACGCAGTACTGGAAGATGTCCGCAAGATAGGGGCA   1500
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU27620___re   1451 ACGTTCTCGTAGAAAATGCAGTACTGGAAGATGTCCGCAAGATAGGGGCA   1500

BSNT_04007___   1501 AATAAAACTCATGTCAAAATGACGATCAGAAACGAGTCGTCCCAGCTTGA   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1501 AATAAAACTCATGTCAAAATGACGATCAGAAACGAGTCGTCCCAGCTTGA   1550

BSNT_04007___   1551 TTGCGTCGGTTTTAATAAAGGCGAGCTTCAAGAAGGCATCGTACCGGGTT   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1551 TTGCGTCGGTTTTAATAAAGGCGAGCTTCAAGAAGGCATCGTACCGGGTT   1600

BSNT_04007___   1601 CAAGAATTTCCATTGTCGGTGAGATGTCAATCAACGAATGGAACAATCGA   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1601 CAAGAATTTCCATTGTCGGTGAGATGTCAATCAACGAATGGAACAATCGA   1650

BSNT_04007___   1651 AAAAAGCCGCAGCTTATGATAAAGGATGCCGCTGTTTCTGAATGGCAGCT   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1651 AAAAAGCCGCAGCTTATGATAAAGGATGCCGCTGTTTCTGAATGGCAGCT   1700

BSNT_04007___   1701 GTTTGATTTAAGGGGAAAACGGACGTGGGAAGACACAGTTTCCGCCCTTC   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1701 GTTTGATTTAAGGGGAAAACGGACGTGGGAAGACACAGTTTCCGCCCTTC   1750

BSNT_04007___   1751 CATCTGCTAAACGGGCCATTGTCTCTTTCAAAGAAGACTCAACAACATTA   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1751 CATCTGCTAAACGGGCCATTGTCTCTTTCAAAGAAGACTCAACAACATTA   1800

BSNT_04007___   1801 CTTCAAACTGAAGACCTTCGCCGAGAAGTGCACGTCATCAGTTCTAAAGA   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1801 CTTCAAACTGAAGACCTTCGCCGAGAAGTGCACGTCATCAGTTCTAAAGA   1850

BSNT_04007___   1851 TCAAGCAAAGGCGTTTGACCTCGATGGTGCATATATTGTATTACTGGATC   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1851 TCAAGCAAAGGCGTTTGACCTCGATGGTGCATATATTGTATTACTGGATC   1900

BSNT_04007___   1901 CGCCGCCTTCGCTGGACATGCTCGCACGTTTACTGGAAGGCAAGGCGCCT   1950
                     |||||||||||||||||||||||||||||||.||||||||.||||||||.
BSU27620___re   1901 CGCCGCCTTCGCTGGACATGCTCGCACGTTTGCTGGAAGGAAAGGCGCCC   1950

BSNT_04007___   1951 GAGCGGATATATTTTATTTTTCTCAATCATGAGGACCACTTTTTATCAAC   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   1951 GAGCGGATATATTTTATTTTTCTCAATCATGAGGACCACTTTTTATCAAC   2000

BSNT_04007___   2001 TTTTCCCGCAAGAGACCACTTTAAATGGTATTATGCGTTCTTGCTGAAAA   2050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   2001 TTTTCCCGCAAGAGACCACTTTAAATGGTATTATGCGTTCTTGCTGAAAA   2050

BSNT_04007___   2051 GAGGCGCTTTTGACGTGAAAAAACACGGTTCAGAGCTTGCAAAACATAAA   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   2051 GAGGCGCTTTTGACGTGAAAAAACACGGTTCAGAGCTTGCAAAACATAAA   2100

BSNT_04007___   2101 GGCTGGTCCGTTGAAACAATCAATTTCATGACAAAGGTGTTTTTTGATCT   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   2101 GGCTGGTCCGTTGAAACAATCAATTTCATGACAAAGGTGTTTTTTGATCT   2150

BSNT_04007___   2151 CGGTTTTGTTAAAATAGAGAATGGTGTGCTGTCTGTTGTGAGCGGAGCAA   2200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   2151 CGGTTTTGTTAAAATAGAGAATGGTGTGCTGTCTGTTGTGAGCGGAGCAA   2200

BSNT_04007___   2201 AGAAACGCGACTTAACAGACTCACAAACATATCAGGCGAAACAGCAGCTG   2250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   2201 AGAAACGCGACTTAACAGACTCACAAACATATCAGGCGAAACAGCAGCTG   2250

BSNT_04007___   2251 ATGGAACTGGATCAAAAGCTGAATTATTCTTCTGCTGAAGAGCTGAAGGA   2300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   2251 ATGGAACTGGATCAAAAGCTGAATTATTCTTCTGCTGAAGAGCTGAAGGA   2300

BSNT_04007___   2301 ATGGCTGAATAAGCTGATGAAACAAGATTCAGAGGCTTATGAAAGTACGA   2350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27620___re   2301 ATGGCTGAATAAGCTGATGAAACAAGATTCAGAGGCTTATGAAAGTACGA   2350

BSNT_04007___   2351 GGAGGACATAA   2361
                     |||||||||||
BSU27620___re   2351 GGAGGACATAA   2361


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.