Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04022 and BSU27730

See Amino acid alignment / Visit BSNT_04022 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:18
# Commandline: needle
#    -asequence dna-align/BSNT_04022___ruvB.1.22522.seq
#    -bsequence dna-align/BSU27730___ruvB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04022___ruvB-BSU27730___ruvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04022___ruvB-BSU27730___ruvB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04022___ruvB
# 2: BSU27730___ruvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1005
# Identity:    1004/1005 (99.9%)
# Similarity:  1004/1005 (99.9%)
# Gaps:           0/1005 ( 0.0%)
# Score: 5016.0
# 
#
#=======================================

BSNT_04022___      1 ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru      1 ATGGATGAACGGCTCGTCTCAAGTGAAGCAGACAACCATGAATCAGTGAT     50

BSNT_04022___     51 AGAGCAAAGCCTGAGGCCGCAAAATCTGGCACAGTATATCGGGCAGCATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru     51 AGAGCAAAGCCTGAGGCCGCAAAATCTGGCACAGTATATCGGGCAGCATA    100

BSNT_04022___    101 AGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    101 AGGTAAAAGAAAATTTGCGCGTGTTTATAGATGCGGCGAAAATGAGACAG    150

BSNT_04022___    151 GAGACGCTGGATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    151 GAGACGCTGGATCATGTTCTTCTGTACGGGCCGCCCGGACTCGGAAAAAC    200

BSNT_04022___    201 AACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAATTGCGGACGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    201 AACGCTTGCTTCGATTGTTGCTAATGAAATGGGAGTGGAATTGCGGACGA    250

BSNT_04022___    251 CATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    251 CATCAGGGCCTGCGATTGAAAGGCCTGGTGATTTGGCTGCTATATTAACG    300

BSNT_04022___    301 GCGCTGGAACCGGGAGATGTATTATTTATTGATGAAATACATAGGCTGCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    301 GCGCTGGAACCGGGAGATGTATTATTTATTGATGAAATACATAGGCTGCA    350

BSNT_04022___    351 CAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    351 CAGATCGATCGAAGAGGTGCTTTATCCTGCAATGGAAGACTTTTGCCTGG    400

BSNT_04022___    401 ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    401 ACATTGTGATTGGCAAAGGCCCATCTGCCCGCTCGGTTCGCCTCGACCTT    450

BSNT_04022___    451 CCGCCTTTTACGCTGGTGGGAGCCACGACGAGGGTGGGGCTTTTGACGGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    451 CCGCCTTTTACGCTGGTGGGAGCCACGACGAGGGTGGGGCTTTTGACGGC    500

BSNT_04022___    501 TCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    501 TCCTTTAAGAGACAGATTCGGCGTAATGTCTCGCCTTGAGTACTATACAC    550

BSNT_04022___    551 AAGAAGAACTGGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    551 AAGAAGAACTGGCGGATATTGTCACAAGAACCGCTGATGTATTCGAGGTT    600

BSNT_04022___    601 GAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGATCGAGAGGGAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    601 GAGATTGATAAACCGTCGGCTCTTGAAATTGCAAGAAGATCGAGAGGGAC    650

BSNT_04022___    651 GCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    651 GCCCCGCGTGGCGAACCGCCTGCTGAGAAGGGTGCGCGATTTCGCCCAAG    700

BSNT_04022___    701 TGCTGGGTGACAGCAGGATTACGGAAGACATTTCTCAGAATGCGCTGGAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    701 TGCTGGGTGACAGCAGGATTACGGAAGACATTTCTCAGAATGCGCTGGAG    750

BSNT_04022___    751 CGGCTTCAGGTTGACCGTCTCGGTTTGGATCATATTGATCATAAGCTGCT    800
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU27730___ru    751 CGGCTTCAGGTTGACCGCCTCGGTTTGGATCATATTGATCATAAGCTGCT    800

BSNT_04022___    801 GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    801 GATGGGCATGATCGAAAAATTCAACGGCGGCCCAGTAGGCCTTGATACGA    850

BSNT_04022___    851 TTTCAGCTACCATCGGCGAGGAATCGCATACGATTGAAGACGTATATGAA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    851 TTTCAGCTACCATCGGCGAGGAATCGCATACGATTGAAGACGTATATGAA    900

BSNT_04022___    901 CCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    901 CCATATCTGCTGCAAATTGGATTTATACAAAGAACGCCGCGTGGAAGGAT    950

BSNT_04022___    951 CGTGACACCGGCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27730___ru    951 CGTGACACCGGCCGTTTATCATCATTTCCAAATGGAGGCTCCCCGATATG   1000

BSNT_04022___   1001 ACTGA   1005
                     |||||
BSU27730___ru   1001 ACTGA   1005


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04022 and BSU27730

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
