Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04050 and BSU27880

See Amino acid alignment / Visit BSNT_04050 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:21
# Commandline: needle
#    -asequence dna-align/BSNT_04050___nifS.1.22522.seq
#    -bsequence dna-align/BSU27880___nifS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04050___nifS-BSU27880___nifS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04050___nifS-BSU27880___nifS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04050___nifS
# 2: BSU27880___nifS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1203
# Identity:    1182/1203 (98.3%)
# Similarity:  1182/1203 (98.3%)
# Gaps:          15/1203 ( 1.2%)
# Score: 5886.0
# 
#
#=======================================

BSNT_04050___      1 ATGGAGGAAGACCGGATGATTTATTTAGATTATGCAGCGACAACGCCTAT     50
                                    |||||||||||||||||||||||||||||||||||
BSU27880___ni      1 ---------------ATGATTTATTTAGATTATGCAGCGACAACGCCTAT     35

BSNT_04050___     51 TTGTGAGGAAGCCCTTACTGTATATCAGAAGCTTAGTATGGATATGTACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni     36 TTGTGAGGAAGCCCTTACTGTATATCAGAAGCTTAGTATGGATATGTACG     85

BSNT_04050___    101 GAAATGCCAGCAGCCTGCATGATGCAGGAGGAAAAGCAAAGCACATACTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni     86 GAAATGCCAGCAGCCTGCATGATGCAGGAGGAAAAGCAAAGCACATACTG    135

BSNT_04050___    151 GAGTACTGCCGTGAAAAAATCGCCAACATCATTGGCGGAGAAGCAAGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    136 GAGTACTGCCGTGAAAAAATCGCCAACATCATTGGCGGAGAAGCAAGCGG    185

BSNT_04050___    201 CATCTATTTTACAAGCGGCGGCACTGAATCCAATTTTCTGGCCATTCAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    186 CATCTATTTTACAAGCGGCGGCACTGAATCCAATTTTCTGGCCATTCAAT    235

BSNT_04050___    251 CATTGCTAAACGGCCTGCCAAAAACGAAAAGACATTTTATTATGACTGCC    300
                     |||||.||||||||||||||||||||||||||||||||||||.|||||||
BSU27880___ni    236 CATTGTTAAACGGCCTGCCAAAAACGAAAAGACATTTTATTACGACTGCC    285

BSNT_04050___    301 ATGGAGCATCAGTCCATTCATAATTGCGCTGCTTTTTTGGAACAGCAGGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    286 ATGGAGCATCAGTCCATTCATAATTGCGCTGCTTTTTTGGAACAGCAGGG    335

BSNT_04050___    351 ATATGATGTAACAGTCATTGAACCGAATGAATACGGGCTTATTACCGAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    336 ATATGATGTAACAGTCATTGAACCGAATGAATACGGGCTTATTACCGAGG    385

BSNT_04050___    401 AAATATTACTAGCCCATATCCGGCCGGAAACAGGCCTTGTATCTATTCAG    450
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU27880___ni    386 AAATATTACTAACCCATATCCGGCCGGAAACAGGCCTTGTATCTATTCAG    435

BSNT_04050___    451 CATGCAAATTCTGAAACCGGGATCATTCAGCCCATTCAACGCCTGTCTTC    500
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU27880___ni    436 CATGCAAATTCTGAAACCGGGATCATTCAGCCCATTCAACACCTGTCTTC    485

BSNT_04050___    501 ATACCTGCACAATAAGGGGATTCTTCTTCATTGCGACGCTGTTCAAACGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    486 ATACCTGCACAATAAGGGGATTCTTCTTCATTGCGACGCTGTTCAAACGT    535

BSNT_04050___    551 TTGGAAAGATCCCGATCAATACAAAAAATCTGGGAGTAGATGCACTCTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    536 TTGGAAAGATCCCGATCAATACAAAAAATCTGGGAGTAGATGCACTCTCA    585

BSNT_04050___    601 ATGTCCAGCCATAAAATCCACGGTCCAAAAGGAGTAGGGGCGGTCTATAT    650
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU27880___ni    586 ATGTCCAGCCATAAAATCCACGGTCCTAAAGGAGTAGGGGCGGTCTATAT    635

BSNT_04050___    651 CCGGCCGGATGTCCCTTGGAAACCCGTTTATCATCTGACTACTCACGAAT    700
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU27880___ni    636 CCGGCCGGATGTCCCTTGGAAACCCGTTTATCCTCTGACTACTCACGAAT    685

BSNT_04050___    701 ACGGATTCAGAGCCGGCACCGTAAATGTTCCCGGGATCGGTGCCTTCACT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    686 ACGGATTCAGAGCCGGCACCGTAAATGTTCCCGGGATCGGTGCCTTCACT    735

BSNT_04050___    751 GCCGCTGCAGAATTGATCGTAAGCGAAATGGAAAAACAGATATCCCGCAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    736 GCCGCTGCAGAATTGATCGTAAGCGAAATGGAAAAACAGATATCCCGCAA    785

BSNT_04050___    801 TGAGGCATTAAGAACATACTTTCTAGACCAAATCCGTATTCGGTCTCTCC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    786 TGAGGCATTAAGAACATACTTTCTAGACCAAATCCGTATTCGGTCTCTCC    835

BSNT_04050___    851 CTGTAACCCTTGCAGCAGACACTTCGAAAGCAGAATGTCTTCCGCATATT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    836 CTGTAACCCTTGCAGCAGACACTTCGAAAGCAGAATGTCTTCCGCATATT    885

BSNT_04050___    901 ATAGGGTGTTTTTTTCACTCATTTGAAGGACAATATGTTATGTTAGAATG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    886 ATAGGGTGTTTTTTTCACTCATTTGAAGGACAATATGTTATGTTAGAATG    935

BSNT_04050___    951 TAATCGGAGTAATATTTGCATTTCAACCGGCAGCGCTTGTTCTGCAGGTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    936 TAATCGGAGTAATATTTGCATTTCAACCGGCAGCGCTTGTTCTGCAGGTT    985

BSNT_04050___   1001 ACCACGGTCCGTCTGAAACAATGAAAGCATTAAGAAAAACCGAACAAGAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni    986 ACCACGGTCCGTCTGAAACAATGAAAGCATTAAGAAAAACCGAACAAGAA   1035

BSNT_04050___   1051 GCTCTGCAATTTATCCGCATCTCTTTTGGCAGGCATACAACAGCTGAACA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni   1036 GCTCTGCAATTTATCCGCATCTCTTTTGGCAGGCATACAACAGCTGAACA   1085

BSNT_04050___   1101 GCTGGAACAGTTATTACATACGTTTACAGTGCTTTGGGAACAAAAGAAAG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni   1086 GCTGGAACAGTTATTACATACGTTTACAGTGCTTTGGGAACAAAAGAAAG   1135

BSNT_04050___   1151 GAGAATTTGATATTGACCGAAGAATTAAAGCTAATGGGCGCCAACAGGCG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27880___ni   1136 GAGAATTTGATATTGACCGAAGAATTAAAGCTAATGGGCGCCAACAGGCG   1185

BSNT_04050___   1201 TGA   1203
                     |||
BSU27880___ni   1186 TGA   1188


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