Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04064 and BSU28000

See Amino acid alignment / Visit BSNT_04064 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_04064___minC.1.22522.seq
#    -bsequence dna-align/BSU28000___minC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04064___minC-BSU28000___minC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04064___minC-BSU28000___minC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04064___minC
# 2: BSU28000___minC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity:     678/690 (98.3%)
# Similarity:   678/690 (98.3%)
# Gaps:           9/690 ( 1.3%)
# Score: 3378.0
# 
#
#=======================================

BSNT_04064___      1 GTGAATATTGTGAAGACCAAAAAGCAGCAATATGTAACAATAAAAGGAAC     50
                              |||||||||||||||||||||||||||||||||||||||||
BSU28000___mi      1 ---------GTGAAGACCAAAAAGCAGCAATATGTAACAATAAAAGGAAC     41

BSNT_04064___     51 AAAGAATGGACTAACATTGCATCTGGATGATGCGTGTTCTTTTGATGAGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi     42 AAAGAATGGACTAACATTGCATCTGGATGATGCGTGTTCTTTTGATGAGC     91

BSNT_04064___    101 TTCTCGATGGTCTTCAGAATATGCTGTCAATTGAACAATATACCGATGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi     92 TTCTCGATGGTCTTCAGAATATGCTGTCAATTGAACAATATACCGATGGA    141

BSNT_04064___    151 AAAGGCCAGAAAATCAGCGTTCATGTTAAGCTGGGAAATCGCTTTTTATA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    142 AAAGGCCAGAAAATCAGCGTTCATGTTAAGCTGGGAAATCGCTTTTTATA    191

BSNT_04064___    201 TAAGGAGCAAGAGGAACAGCTAACCGAATTGATTGCGTCAAAGAAAGATT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    192 TAAGGAGCAAGAGGAACAGCTAACCGAATTGATTGCGTCAAAGAAAGATT    241

BSNT_04064___    251 TGTTTGTTCATTCTATTGACAGTGAAGTCATTACTAAAAAAGAAGCACAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    242 TGTTTGTTCATTCTATTGACAGTGAAGTCATTACTAAAAAAGAAGCACAG    291

BSNT_04064___    301 CAGATAAGAGAGGAAGCCGAAATTATTTCTGTTTCAAAAATTGTCCGTTC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    292 CAGATAAGAGAGGAAGCCGAAATTATTTCTGTTTCAAAAATTGTCCGTTC    341

BSNT_04064___    351 AGGCCAAGTGCTGCAGGTAAAAGGCGACTTGCTCCTGATCGGTGACGTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    342 AGGCCAAGTGCTGCAGGTAAAAGGCGACTTGCTCCTGATCGGTGACGTGA    391

BSNT_04064___    401 ATCCCGGCGGAACAGTCAGGGCCGGAGGGAACATTTTTGTTCTGGGCTCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    392 ATCCCGGCGGAACAGTCAGGGCCGGAGGGAACATTTTTGTTCTGGGCTCA    441

BSNT_04064___    451 CTGAAAGGAATCGCGCATGCCGGATTTAATGGAAATAATCAAGCGGTCAT    500
                     |||||||||||.||||||||.|||||.|||||||||||||||||||||||
BSU28000___mi    442 CTGAAAGGAATTGCGCATGCTGGATTCAATGGAAATAATCAAGCGGTCAT    491

BSNT_04064___    501 CGCCGCCTCTGAAATGCTTCCGACACAATTAAGAATCAATCATGTGTTAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    492 CGCCGCCTCTGAAATGCTTCCGACACAATTAAGAATCAATCATGTGTTAA    541

BSNT_04064___    551 ATCGCTCCCCAGACCACATTCAAAAAGGGAACGAAATGGAATGTGCTTAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    542 ATCGCTCCCCAGACCACATTCAAAAAGGGAACGAAATGGAATGTGCTTAT    591

BSNT_04064___    601 TTAGATACAGACGGAAATATGGTCATTGAACGCCTTCAACATTTGGCTCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    592 TTAGATACAGACGGAAATATGGTCATTGAACGCCTTCAACATTTGGCTCA    641

BSNT_04064___    651 TTTAAGACCTGATCTAACAAGGCTTGAGGGAGGAATGTGA    690
                     ||||||||||||||||||||||||||||||||||||||||
BSU28000___mi    642 TTTAAGACCTGATCTAACAAGGCTTGAGGGAGGAATGTGA    681


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