Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04070 and BSU28040

See Amino acid alignment / Visit BSNT_04070 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence dna-align/BSNT_04070___radC.1.22522.seq
#    -bsequence dna-align/BSU28040___radC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04070___radC-BSU28040___radC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04070___radC-BSU28040___radC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04070___radC
# 2: BSU28040___radC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity:     692/696 (99.4%)
# Similarity:   692/696 (99.4%)
# Gaps:           0/696 ( 0.0%)
# Score: 3444.0
# 
#
#=======================================

BSNT_04070___      1 TTGGTCATACACGATCTGCCATTAAAACTCAAAGATTTCCCAATCAAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU28040___ra      1 TTGGTCATACACGATCTGCCATTAAAACTCAAAGATTTCCCAATGAAAGA     50

BSNT_04070___     51 AAAGCCAAGAGAACGGCTCCTGAAAGTCGGAGCCGAGAACTTAGCGAATC    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU28040___ra     51 AAAGCCAAGGGAACGGCTCCTGAAAGTCGGAGCCGAGAACTTAGCGAATC    100

BSNT_04070___    101 ATGAACTTTTGGCTATATTATTGCGGACAGGGACTAAACACGAATCTGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    101 ATGAACTTTTGGCTATATTATTGCGGACAGGGACTAAACACGAATCTGTT    150

BSNT_04070___    151 TTGGACCTGTCAAACCGGCTGCTGCGCTCATTTGACGGGCTGCGCCTGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    151 TTGGACCTGTCAAACCGGCTGCTGCGCTCATTTGACGGGCTGCGCCTGCT    200

BSNT_04070___    201 CAAGGAAGCATCGGTTGAAGAGCTGTCGAGCATCCCGGGAATCGGTATGG    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU28040___ra    201 CAAGGAAGCATCGGTTGAAGAGCTGTCAAGCATCCCGGGAATCGGTATGG    250

BSNT_04070___    251 TAAAAGCGATTCAAATACTGGCTGCAGTTGAGCTTGGAAGCCGGATTCAT    300
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU28040___ra    251 TAAAAGCGATTCAAATACTGGCAGCAGTTGAGCTTGGAAGCCGGATTCAT    300

BSNT_04070___    301 AAATTAGCCAACGAAGAACATTTCGTTATTCGCTCCCCGGAAGACGGCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    301 AAATTAGCCAACGAAGAACATTTCGTTATTCGCTCCCCGGAAGACGGCGC    350

BSNT_04070___    351 TAATCTTGTCATGGAGGATATGCGCTTTTTAACCCAGGAGCATTTTGTCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    351 TAATCTTGTCATGGAGGATATGCGCTTTTTAACCCAGGAGCATTTTGTCT    400

BSNT_04070___    401 GTTTATACTTAAATACAAAAAATCAAGTCATCCATAAACGCACCGTATTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    401 GTTTATACTTAAATACAAAAAATCAAGTCATCCATAAACGCACCGTATTT    450

BSNT_04070___    451 ATCGGAAGCCTGAATTCATCTATTGTCCACCCGCGAGAGGTGTTTAAAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    451 ATCGGAAGCCTGAATTCATCTATTGTCCACCCGCGAGAGGTGTTTAAAGA    500

BSNT_04070___    501 AGCGTTTAAACGATCTGCCGCTTCCTTTATCTGTGTTCATAATCATCCTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    501 AGCGTTTAAACGATCTGCCGCTTCCTTTATCTGTGTTCATAATCATCCTT    550

BSNT_04070___    551 CTGGAGATCCGACGCCGAGCAGGGAAGATATTGAAGTGACAAGACGGCTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    551 CTGGAGATCCGACGCCGAGCAGGGAAGATATTGAAGTGACAAGACGGCTG    600

BSNT_04070___    601 TTTGAATGCGGAAACCTGATTGGCATCGAGCTGCTTGACCATTTGGTGAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    601 TTTGAATGCGGAAACCTGATTGGCATCGAGCTGCTTGACCATTTGGTGAT    650

BSNT_04070___    651 CGGGGATAAAAAATTTGTGAGTTTAAAGGAAAAAGGATATTTGTAA    696
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU28040___ra    651 CGGGGATAAAAAATTTGTGAGTTTAAAGGAAAAAGGATATTTGTAA    696


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