Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04074 and BSU28060

See Amino acid alignment / Visit BSNT_04074 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence dna-align/BSNT_04074___spoIIB.1.22522.seq
#    -bsequence dna-align/BSU28060___spoIIB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04074___spoIIB-BSU28060___spoIIB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04074___spoIIB-BSU28060___spoIIB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04074___spoIIB
# 2: BSU28060___spoIIB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 999
# Identity:     974/999 (97.5%)
# Similarity:   974/999 (97.5%)
# Gaps:           0/999 ( 0.0%)
# Score: 4770.0
# 
#
#=======================================

BSNT_04074___      1 TTGAAAAAAAGAAAGAATAAAAAAAACAGTAAAGCCGCAGAAAAAGCCCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp      1 TTGAAAAAAAGAAAGAATAAAAAAAACAGTAAAGCCGCAGAAAAAGCCCT     50

BSNT_04074___     51 CAAGGTGACGATTAATGGAAAAGAAGAGACGGTTTACGAACAAGAGACGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp     51 CAAGGTGACGATTAATGGAAAAGAAGAGACGGTTTACGAACAAGAGACGC    100

BSNT_04074___    101 CTGAGACAGAGGCGGATAAAAGCATGACATTTTCAAATTGGGAGGAAAAA    150
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU28060___sp    101 CTGAGACAGAGGCGAATAAAAGCATGACATTTTCAAATTGGGAGGAAAAA    150

BSNT_04074___    151 AGACAGGCAGAACAAGAGGTTGCGGCATCCCAGGAACATCCTGATGAAGA    200
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU28060___sp    151 AGACAGGCAGAACAAGAGGTTGCGGCATCCCAGGAACACCCTGATGAAGA    200

BSNT_04074___    201 TGAATTCAATTGGGATTCAGAGGAAGACAAGGTGTTTAAAGAGGACCCAA    250
                     ||||||||||||||||||.|||||.|||||||||||||||||||||||.|
BSU28060___sp    201 TGAATTCAATTGGGATTCCGAGGAGGACAAGGTGTTTAAAGAGGACCCTA    250

BSNT_04074___    251 AAGTTGTTCCTCCTTTTCAAAAGAAAAAAACAAAGCTTTATGCAAAAGGA    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU28060___sp    251 AAGTTGTTCCTCCTTTTCAAAAGAAAAAAACAAAGCTTTACGCAAAAGGA    300

BSNT_04074___    301 AAGACCGGGGCTGCCAAACCGGTAAAAAGAGTGGCCGCGACGATTGCCTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp    301 AAGACCGGGGCTGCCAAACCGGTAAAAAGAGTGGCCGCGACGATTGCCTT    350

BSNT_04074___    351 CGCGGCTGTCATTGGCACTGGATTAGGGCTATTCGCGTTAAACATATCGG    400
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU28060___sp    351 CGCGGCTGTCATTGGCACTGGATTAGGGTTATTCGCGTTAAACATATCGG    400

BSNT_04074___    401 GGAATAAAGAAGCGTCAGCACCGGCCTCTTTAGAGGATTCTCTAGGCAGC    450
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU28060___sp    401 GGAATAAAGAAGCGTCAGCACCGGCCTCTTTAGAGGATTCTTTAGGCAGC    450

BSNT_04074___    451 CAAACGGCAAAAGCAGGGGATACTTCAACTGATAAACAAACTTCAGGCAC    500
                     ||||||||||||||||||||||||||..|||||||||||||.||||||.|
BSU28060___sp    451 CAAACGGCAAAAGCAGGGGATACTTCTGCTGATAAACAAACCTCAGGCGC    500

BSNT_04074___    501 AGAAAAACAAGCGGCGCAAACTGAAGGTACATATAAAACATACGCTGTAC    550
                     |||||||||||||||.|||||||||||||||||.||||||||||||||.|
BSU28060___sp    501 AGAAAAACAAGCGGCACAAACTGAAGGTACATACAAAACATACGCTGTGC    550

BSNT_04074___    551 AAGCCGGAAAATTTTCAAATGAAAAGGGTGCCGAAACGTTAACAGAACAA    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU28060___sp    551 AAGCCGGAAAATTTTCAAATGAAAAGGGCGCCGAAACGTTAACAGAACAA    600

BSNT_04074___    601 TTGACCGAAAAAGGATATTCCGCCGTGTCACTGTCAAAGGATGACGGGTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp    601 TTGACCGAAAAAGGATATTCCGCCGTGTCACTGTCAAAGGATGACGGGTA    650

BSNT_04074___    651 TACGTATGTCATCGCGGGCTTAGCCAGTGATAAGGATGTCTCACAGCAGT    700
                     |||||||||.||.||.||||||||.|||||.|||||.|||||||||||||
BSU28060___sp    651 TACGTATGTTATTGCAGGCTTAGCAAGTGAAAAGGAGGTCTCACAGCAGT    700

BSNT_04074___    701 TAGGACAGGTTTTAATCGACAGTGATTTTGAAGCCTGGGGAGGCAAGGAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp    701 TAGGACAGGTTTTAATCGACAGTGATTTTGAAGCCTGGGGAGGCAAGGAG    750

BSNT_04074___    751 CTTTCCTTATCAATAGAGTCAGATATGACAGATTCTTTTAAGGAAACAGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp    751 CTTTCCTTATCAATAGAGTCAGATATGACAGATTCTTTTAAGGAAACAGC    800

BSNT_04074___    801 GGAGCTTGCAGCAAAGGCGATTCTCGGCGAAGACATTACAAAAGCGAGTG    850
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU28060___sp    801 GGAGCTTGCAGCAAAGGCGATTCTCGACGAAGACATTACAAAAGCGAGTG    850

BSNT_04074___    851 TAGAGAAAATAGAAAAGTCTCTTGGTGAAACAAAAGCGTCAGAAACAGGA    900
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU28060___sp    851 TAGAGAAAATAGAAAAGTCGCTTGGTGAAACAAAAGCGTCAGAAACAGGA    900

BSNT_04074___    901 GAGAAAAAAGCGATTTTGCAGGCTTTAAAGGAATTAGAGGATCCAAGTGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28060___sp    901 GAGAAAAAAGCGATTTTGCAGGCTTTAAAGGAATTAGAGGATCCAAGTGC    950

BSNT_04074___    951 TGAAGCCGGGTGGAAGGCTCAGCAGCAGCTGTTAGCCGTCGTAAAATAA    999
                     |||||||||||||||||||||||||.|||||||||||||||||||||||
BSU28060___sp    951 TGAAGCCGGGTGGAAGGCTCAGCAGGAGCTGTTAGCCGTCGTAAAATAA    999


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