Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04117 and BSU28340

See Amino acid alignment / Visit BSNT_04117 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence dna-align/BSNT_04117___ysnF.1.22522.seq
#    -bsequence dna-align/BSU28340___ysnF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04117___ysnF-BSU28340___ysnF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04117___ysnF-BSU28340___ysnF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04117___ysnF
# 2: BSU28340___ysnF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 825
# Identity:     807/825 (97.8%)
# Similarity:   807/825 (97.8%)
# Gaps:           3/825 ( 0.4%)
# Score: 3964.0
# 
#
#=======================================

BSNT_04117___      1 ATGAAAAGCATAGTTGGTGTATATGAAACTCCGCAGGAAACCATCGCAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys      1 ATGAAAAGCATAGTTGGTGTATATGAAACTCCGCAGGAAACCATCGCAGC     50

BSNT_04117___     51 GATTGAAGGCTTACTCACAAAAGGCTATGATTCTGATGACATTTCTGTTG    100
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU28340___ys     51 GATTGAAGGCTTACTTACAAAAGGCTATGATTCTGATGACATTTCTGTTG    100

BSNT_04117___    101 TGACAAGCCGGCGAGATACAGATTATTTGGAGTCACGTACAGGAACAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys    101 TGACAAGCCGGCGAGATACAGATTATTTGGAGTCACGTACAGGAACAGAA    150

BSNT_04117___    151 GTCAATCAAGCCATCGATGCACATCAAGACGAATCTGAATCTTTTTTCGA    200
                     |||||||||||.||||||||||||||.|||||||||||||||||||||||
BSU28340___ys    151 GTCAATCAAGCTATCGATGCACATCAGGACGAATCTGAATCTTTTTTCGA    200

BSNT_04117___    201 TAAACTGAAAGATTATTTCACAATGGATGATACTGCTACACACAGCAAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys    201 TAAACTGAAAGATTATTTCACAATGGATGATACTGCTACACACAGCAAAG    250

BSNT_04117___    251 CATTATCCGACTTGGATATTAAAACTGATGAAATAGACAAGTATCAAGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys    251 CATTATCCGACTTGGATATTAAAACTGATGAAATAGACAAGTATCAAGAA    300

BSNT_04117___    301 GATTTGGATGACGGAAAACTTTTGGTAGCCGTCGATACAGATGCAGATGT    350
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU28340___ys    301 GATTTGGATGACGGAAAACTTCTGGTAGCCGTCGATACAGATGCAGATGT    350

BSNT_04117___    351 AATTGCTCCTGTTGATAACGGCAATGCCCTTTCAAGCGGCTTTTCAGGCA    400
                     ||||||||||.|||||||||||||||||||||||.|||||||||||.|||
BSU28340___ys    351 AATTGCTCCTATTGATAACGGCAATGCCCTTTCAGGCGGCTTTTCAAGCA    400

BSNT_04117___    401 CAAATGAATTGGACTATACAACAAAAGAAGAAAAAACGATGCCGCTCCGA    450
                     |||||||||||||.||||||||.||||||||||||||||||||||||||.
BSU28340___ys    401 CAAATGAATTGGATTATACAACGAAAGAAGAAAAAACGATGCCGCTCCGG    450

BSNT_04117___    451 GAAGAACAGCTGAAGGTCGATAAGGAAGACGTTCAAACCGGCGAAGTAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys    451 GAAGAACAGCTGAAGGTCGATAAGGAAGACGTTCAAACCGGCGAAGTAGA    500

BSNT_04117___    501 AATAGGAAAAGAAGTGAAAACAGAAAAAAGAGATATGGACATTCCTGTGA    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU28340___ys    501 AATAGGAAAAGAAGTGAAAACAGAAAAAAGAGATATGGACATTCCGGTGA    550

BSNT_04117___    551 GACATGATGAAATTTATGTCGAACGCCGTCCAGTGGATGAAAATAAAACG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys    551 GACATGATGAAATTTATGTCGAACGCCGTCCAGTGGATGAAAATAAAACG    600

BSNT_04117___    601 GACGCTGCTCCCGTCAACGATTCGGAAGAGATCAGAGTTCCAATCGTTGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys    601 GACGCTGCTCCCGTCAACGATTCGGAAGAGATCAGAGTTCCAATCGTTGA    650

BSNT_04117___    651 GGAAAAGCTTGAAGCGACTAAAAAACCGGTTGTCACTGATGAAGTGGTTG    700
                     |||||||||.||||.|||||||||||||||||||||||||||||||||||
BSU28340___ys    651 GGAAAAGCTGGAAGTGACTAAAAAACCGGTTGTCACTGATGAAGTGGTTG    700

BSNT_04117___    701 TCGGCAAACGCACTGTTGAAGAAAATGAACATATTTCTGAAACTGTGAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28340___ys    701 TCGGCAAACGCACTGTTGAAGAAAATGAACATATTTCTGAAACTGTGAAA    750

BSNT_04117___    751 AAAGAAGAACCTCGTCTGAATAAAGAAGGAAAAGTTGACGGCTTGGATGA    800
                     |||||||||||||||||||||||||||||||||||||||||||||   ||
BSU28340___ys    751 AAAGAAGAACCTCGTCTGAATAAAGAAGGAAAAGTTGACGGCTTG---GA    797

BSNT_04117___    801 TGATGATCCGTTAAATAATAAATAA    825
                     ||||||||||||||||||.||||.|
BSU28340___ys    798 TGATGATCCGTTAAATAACAAATGA    822


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