Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04172 and BSU28590

See Amino acid alignment / Visit BSNT_04172 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence dna-align/BSNT_04172___yshC.1.22522.seq
#    -bsequence dna-align/BSU28590___yshC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04172___yshC-BSU28590___yshC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04172___yshC-BSU28590___yshC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04172___yshC
# 2: BSU28590___yshC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1713
# Identity:    1694/1713 (98.9%)
# Similarity:  1694/1713 (98.9%)
# Gaps:           0/1713 ( 0.0%)
# Score: 8394.0
# 
#
#=======================================

BSNT_04172___      1 ATGCATAAAAAAGATATTATCCGGCTGCTTGAAACCATTGCAGTCTATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys      1 ATGCATAAAAAAGATATTATCCGGCTGCTTGAAACCATTGCAGTCTATAT     50

BSNT_04172___     51 GGAACTAAAAGGGGACAACCCGTTTAAAGTATCCGCCTTTCGAAAAGCGG    100
                     ||||||.||||||||||||||||||||||||||||||||.||||||||||
BSU28590___ys     51 GGAACTCAAAGGGGACAACCCGTTTAAAGTATCCGCCTTCCGAAAAGCGG    100

BSNT_04172___    101 CGGCAGCCCTGGAACAGGACGACCGAAGCTTATCAGAAATGGACGATATG    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    101 CGGCAGCTCTGGAACAGGACGACCGAAGCTTATCAGAAATGGACGATATG    150

BSNT_04172___    151 ATGTCGCTGTCCGGCATTGGAAAAGGAACGTACAGCGTCATTAAAGAGTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    151 ATGTCGCTGTCCGGCATTGGAAAAGGAACGTACAGCGTCATTAAAGAGTA    200

BSNT_04172___    201 TATAGATGAAGGAAAGTCAAGCACGCTCGAATCGCTTCAGAAAGAAGTGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    201 TATAGATGAAGGAAAGTCAAGCACGCTCGAATCGCTTCAGAAAGAAGTGC    250

BSNT_04172___    251 CGGAAGGACTCGTGCCTTTATTGAAGCTGCCGGGGCTCGGCGGCAAAAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    251 CGGAAGGACTCGTGCCTTTATTGAAGCTGCCGGGGCTCGGCGGCAAAAAA    300

BSNT_04172___    301 ATCGCAAAGCTATATAAAGAGCTCGGCGTACATGATGCAGAATCTCTGAA    350
                     |||||||||||.||||||||||||||||||||.|||||||||||||||||
BSU28590___ys    301 ATCGCAAAGCTGTATAAAGAGCTCGGCGTACACGATGCAGAATCTCTGAA    350

BSNT_04172___    351 GGAAGCCTGTGAACAGCAAAAGGTACAAGGTCTTGCGGGCTTCGGCAAAA    400
                     ||||||||||||.|||||||||||.||.||||||||||||||||||||||
BSU28590___ys    351 GGAAGCCTGTGAGCAGCAAAAGGTCCAGGGTCTTGCGGGCTTCGGCAAAA    400

BSNT_04172___    401 AATCGGAAGAAAAAATATTACAGGCGCTCGGGGAAGCCGGAAAACAGCCT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    401 AATCGGAAGAAAAAATATTACAGGCGCTCGGGGAAGCCGGAAAACAGCCT    450

BSNT_04172___    451 GAACGGTTCCCGATCGGCTACGCCCTCCGGATCGCGCGGGAAATTGAGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    451 GAACGGTTCCCGATCGGCTACGCCCTCCGGATCGCGCGGGAAATTGAGGA    500

BSNT_04172___    501 GCATCTTTCTCAATTTACGCATATCATCAAATTTTCTCGTGCCGGAAGTC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    501 GCATCTTTCTCAATTTACGCATATCATCAAATTTTCTCGTGCCGGAAGTC    550

BSNT_04172___    551 TCCGCAGAGCGCGGGAAACGGTGAAGGATCTGGATTATATCATTGCTACA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    551 TCCGCAGAGCGCGGGAAACGGTGAAGGATCTGGATTATATCATTGCTACA    600

BSNT_04172___    601 GATCATCCGGCTGAAGTAAGAGAGCAGCTTCTTGAGCTGCCAAACATCAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    601 GATCATCCGGCTGAAGTAAGAGAGCAGCTTCTTGAGCTGCCAAACATCAA    650

BSNT_04172___    651 AAGCGTGATCGCAAGCGGAGATACGAAGGTGTCCGTCATCCTTTCCTTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    651 AAGCGTGATCGCAAGCGGAGATACGAAGGTGTCCGTCATCCTTTCCTTTG    700

BSNT_04172___    701 AATATGAAACAAGCGTCGATTTCCGTCTTGTGACGGAAGAGCAGTTTCCG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    701 AATATGAAACAAGCGTCGATTTCCGTCTTGTGACGGAAGAGCAGTTTCCG    750

BSNT_04172___    751 ACAACACTCCATCATTTTACGGGATCAAAGGATCACAATATTAAAATGCG    800
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU28590___ys    751 ACAACACTCCATCATTTTACGGGATCAAAGGATCACAATATTAAGATGCG    800

BSNT_04172___    801 CCAAATCGCCAAAGAACGCGGCGAGCGGATCAGTGAATACGGCGTTGAGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    801 CCAAATCGCCAAAGAACGCGGCGAGCGGATCAGTGAATACGGCGTTGAGA    850

BSNT_04172___    851 CAGTTGAAACCGGAGAGATCAAAACATTTCCGAGTGAACGTGAATTTTAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    851 CAGTTGAAACCGGAGAGATCAAAACATTTCCGAGTGAACGTGAATTTTAT    900

BSNT_04172___    901 GCGCACTTCGGCCTGCCGCTGATTCCGCCGGAAATTCGTGAAAGCGGACA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys    901 GCGCACTTCGGCCTGCCGCTGATTCCGCCGGAAATTCGTGAAAGCGGACA    950

BSNT_04172___    951 GGAAGTGGAAACCTACAGCGACAGCATTGAACTGATAGAACCCGGGCAAA   1000
                     |||||||||||||||||||||||||||||||||||||||.|.||||||||
BSU28590___ys    951 GGAAGTGGAAACCTACAGCGACAGCATTGAACTGATAGAGCTCGGGCAAA   1000

BSNT_04172___   1001 TCAAAGGTGATCTCCACATGCACTCAACGTGGAGCGATGGTGCATTTTCG   1050
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU28590___ys   1001 TCAAAGGTGATCTCCACATGCACTCAACGTGGAGCGATGGCGCATTTTCG   1050

BSNT_04172___   1051 ATCAGAGAGATGGCTGAAGCCTGCATCAAAAAAGGCTATCAATACATGGC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1051 ATCAGAGAGATGGCTGAAGCCTGCATCAAAAAAGGCTATCAATACATGGC   1100

BSNT_04172___   1101 GATCACCGATCATTCACAATATTTAAAGGTCGCCAACGGCCTTACTGCAG   1150
                     ||||||||||||.||||||||||||||||||||||||||.||||||||||
BSU28590___ys   1101 GATCACCGATCACTCACAATATTTAAAGGTCGCCAACGGGCTTACTGCAG   1150

BSNT_04172___   1151 AAAGACTTAAGCAGCAGGCAAAAGAAATTGACGCACTGAATGCAGAGTTT   1200
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU28590___ys   1151 AAAGACTTAAGCAGCAGGCAAAAGAAATTGACGCGCTGAATGCAGAGTTT   1200

BSNT_04172___   1201 GAAAACTTCCGTATTTTGAAAGGCGTTGAGATGGATATCCTGCCTGACGG   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1201 GAAAACTTCCGTATTTTGAAAGGCGTTGAGATGGATATCCTGCCTGACGG   1250

BSNT_04172___   1251 TACGCTCGATTATGATGACGATATGCTTGCGGAAATGGATATCGTTATTG   1300
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU28590___ys   1251 TACGCTCGATTATGATGACGATGTGCTTGCGGAAATGGATATCGTTATTG   1300

BSNT_04172___   1301 CATCGATTCATTCCAGTTTTAATCAGCCGGAACACGTGATTATGAAACGG   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1301 CATCGATTCATTCCAGTTTTAATCAGCCGGAACACGTGATTATGAAACGG   1350

BSNT_04172___   1351 CTTGAGACGGCACTGACAAACAAGCATGTTGACATTATCGCACACCCGAC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1351 CTTGAGACGGCACTGACAAACAAGCATGTTGACATTATCGCACACCCGAC   1400

BSNT_04172___   1401 CGGGCGCCTTATCGGCAGACGGGCCGGTTACGAAATCGATATTGATCAGC   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1401 CGGGCGCCTTATCGGCAGACGGGCCGGTTACGAAATCGATATTGATCAGC   1450

BSNT_04172___   1451 TGATTGAGCTTGCGAGGAAAACAAATACGGCGCTTGAACTTAACGCCAAC   1500
                     ||||||||||||||||||||||||||||||||||||||||.||.||||||
BSU28590___ys   1451 TGATTGAGCTTGCGAGGAAAACAAATACGGCGCTTGAACTCAATGCCAAC   1500

BSNT_04172___   1501 CCTGCGCGCCTTGATCTGCGCACAGAGCATTTAATGAAAGCAAACGAACA   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1501 CCTGCGCGCCTTGATCTGCGCACAGAGCATTTAATGAAAGCAAACGAACA   1550

BSNT_04172___   1551 AGGGGTTACATTGGTGATTAATACTGATGCCCATAATATTGAGATGTTAG   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1551 AGGGGTTACATTGGTGATTAATACTGATGCCCATAATATTGAGATGTTAG   1600

BSNT_04172___   1601 ACGATATGAAAACTGGCGTTACTGCCGCGCGCAAAGGATGGACGGAAACG   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28590___ys   1601 ACGATATGAAAACTGGCGTTACTGCCGCGCGCAAAGGATGGACGGAAACG   1650

BSNT_04172___   1651 AAAAACGTTCTGAATGCCCGGTCGCTTAAAGACGTAGAGGTATTTCTGAA   1700
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU28590___ys   1651 AAAAACGTTCTGAATGCCCGGTCGCTTAAAGACGTAGAGGCATTTCTGAA   1700

BSNT_04172___   1701 GCGCAACGATTAA   1713
                     |||||||||||||
BSU28590___ys   1701 GCGCAACGATTAA   1713


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