Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04217 and BSU28910

See Amino acid alignment / Visit BSNT_04217 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:41
# Commandline: needle
#    -asequence dna-align/BSNT_04217___lrgA.1.22522.seq
#    -bsequence dna-align/BSU28910___ysbA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04217___lrgA-BSU28910___ysbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04217___lrgA-BSU28910___ysbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04217___lrgA
# 2: BSU28910___ysbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     437/441 (99.1%)
# Similarity:   437/441 (99.1%)
# Gaps:           0/441 ( 0.0%)
# Score: 2169.0
# 
#
#=======================================

BSNT_04217___      1 ATGAGTGCTAAAAAAGTGTACGGGTTTTTAACACAAGCATTTATTTTTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28910___ys      1 ATGAGTGCTAAAAAAGTGTACGGGTTTTTAACACAAGCATTTATTTTTGC     50

BSNT_04217___     51 CGTCATTATGCTGGTTTCAAATATGATTGCCGCTATTGTCCCAATACCTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28910___ys     51 CGTCATTATGCTGGTTTCAAATATGATTGCCGCTATTGTCCCAATACCTA    100

BSNT_04217___    101 TCCCGGCATCGGTTGTAGGGTTGGTCTTATTATTTCTCCTATTATGTTTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28910___ys    101 TCCCGGCATCGGTTGTAGGGTTGGTCTTATTATTTCTCCTATTATGTTTG    150

BSNT_04217___    151 AAAGTCATTAAACTGGAACAAGTGGAAACGCTCGGAACGTCTTTAACCTC    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU28910___ys    151 AAAGTCATTAAACTGGAACAAGTGGAGACGCTCGGAACGTCTTTAACCTC    200

BSNT_04217___    201 TCTGATCGGATTTTTATTTGTTCCGTCAGGTATATCTGTTATGAATTCGC    250
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU28910___ys    201 TCTGATCGGATTTTTATTTGTTCCATCAGGTATATCTGTTATGAATTCGC    250

BSNT_04217___    251 TTGGTGTGATGCAGCAATACGGCCTGCAAATTGTTCTTGTCATTCTGCTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28910___ys    251 TTGGTGTGATGCAGCAATACGGCCTGCAAATTGTTCTTGTCATTCTGCTC    300

BSNT_04217___    301 GCAACGATTATTCTGCTGGGGGCTACGGGATTGTTTTCTCAGCTGATTCT    350
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU28910___ys    301 GCAACGATTATTTTGCTGGGGGCTACGGGATTGTTTTCTCAGCTGATTCT    350

BSNT_04217___    351 GTCGCTGAGCGGAAAACGCAAAACCGCAGCGGACATGAAAACAAAAACAG    400
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU28910___ys    351 GTCGCTGAGCGGAAAACGCAAAACCGAAGCGGACATGAAAACAAAAACAG    400

BSNT_04217___    401 TGCAAAGCCCGCAGAACAATAACGAACTCGTTCACCATTAA    441
                     |||||||||||||||||||||||||||||||||||||||||
BSU28910___ys    401 TGCAAAGCCCGCAGAACAATAACGAACTCGTTCACCATTAA    441


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