Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04224 and BSU28950

See Amino acid alignment / Visit BSNT_04224 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence dna-align/BSNT_04224___thrS.1.22522.seq
#    -bsequence dna-align/BSU28950___thrS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04224___thrS-BSU28950___thrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04224___thrS-BSU28950___thrS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04224___thrS
# 2: BSU28950___thrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1932
# Identity:    1907/1932 (98.7%)
# Similarity:  1907/1932 (98.7%)
# Gaps:           0/1932 ( 0.0%)
# Score: 9435.0
# 
#
#=======================================

BSNT_04224___      1 ATGTCAGATATGGTAAAAATCACATTTCCTGATGGAGCAGTCAAGGAGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th      1 ATGTCAGATATGGTAAAAATCACATTTCCTGATGGAGCAGTCAAGGAGTT     50

BSNT_04224___     51 TGCGAAAGGAACAACAACAGAAGATATCGCGGCATCCATCAGTCCGGGAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th     51 TGCGAAAGGAACAACAACAGAAGATATCGCGGCATCCATCAGTCCGGGAT    100

BSNT_04224___    101 TAAAGAAAAAATCATTAGCCGGAAAACTGAACGGAAAAGAAATCGATTTG    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU28950___th    101 TAAAGAAAAAGTCATTAGCCGGAAAACTGAACGGAAAAGAAATCGATTTG    150

BSNT_04224___    151 AGAACGCCGATCAATGAAGACGGTACAGTGGAAATCATTACAGAAGGCTC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    151 AGAACGCCGATCAATGAAGACGGTACAGTGGAAATCATTACAGAAGGCTC    200

BSNT_04224___    201 AGAAGAAGGTCTTCAAATTATGCGCCACAGTACGGCTCACTTGCTGGCTC    250
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU28950___th    201 AGAAGAAGGTCTTCAAATTATGCGCCACAGTGCGGCTCACTTGCTGGCTC    250

BSNT_04224___    251 AAGCGATTAAACGCATCTACAAGGATGTTAAATTCGGCGTCGGTCCGGTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    251 AAGCGATTAAACGCATCTACAAGGATGTTAAATTCGGCGTCGGTCCGGTT    300

BSNT_04224___    301 ATCGAAAACGGTTTTTACTACGATGTAGAAATGGACGAAGCGATTACACC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    301 ATCGAAAACGGTTTTTACTACGATGTAGAAATGGACGAAGCGATTACACC    350

BSNT_04224___    351 GGAGGATCTGCCGAAAATCGAGAAAGAAATGAAAAAAATCGTTAATGCGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    351 GGAGGATCTGCCGAAAATCGAGAAAGAAATGAAAAAAATCGTTAATGCGA    400

BSNT_04224___    401 ACCTGCCGATCGTTCGAAAAGAAGTCAGCCGTGAAGAAGCGAAAGCCCGT    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    401 ACCTTCCGATCGTTCGAAAAGAAGTCAGCCGTGAAGAAGCGAAAGCCCGT    450

BSNT_04224___    451 TTTGCGGAAATCGGCGACGACCTGAAGCTTGAACTATTGGATGCGATTCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    451 TTTGCGGAAATCGGCGACGACCTGAAGCTTGAACTATTGGATGCGATTCC    500

BSNT_04224___    501 TGAAGGAGAAACCGTTTCGATCTATGAGCAAGGCGAATTCTTTGACCTGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    501 TGAAGGAGAAACCGTTTCGATCTATGAGCAAGGCGAATTCTTTGACCTGT    550

BSNT_04224___    551 GCCGCGGTGTCCATGTTCCTTCAACCGGAAAAATCAAAGAGTTTAAGCTG    600
                     |||||||.||||||||||||||||||||||||||||||||.|||||||||
BSU28950___th    551 GCCGCGGCGTCCATGTTCCTTCAACCGGAAAAATCAAAGAATTTAAGCTG    600

BSNT_04224___    601 TTAAGCCTTGCAGGCGCATACTGGCGCGGCGACAGCAAAAACCAAATGCT    650
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU28950___th    601 TTAAGCCTTGCAGGCGCATACTGGCGCGGTGACAGCAAAAACCAAATGCT    650

BSNT_04224___    651 TCAGCGCGTATATGGTACAGCTTTCTTCAAAAAAGCTGATCTTGAAGAGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    651 TCAGCGCGTATATGGTACAGCTTTCTTCAAAAAAGCTGATCTTGAAGAGC    700

BSNT_04224___    701 ATCTTCGTATGCTAGAAGAAGCGAAAGAACGCGACCACAGAAAGCTCGGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU28950___th    701 ATCTTCGTATGCTAGAAGAAGCGAAAGAACGCGACCACAGAAAGCTTGGC    750

BSNT_04224___    751 AAAGAATTAAAGCTGTTTGCGAACTCTCAAAAAGTCGGACAAGGCCTGCC    800
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU28950___th    751 AAAGAATTAAAGCTGTTCGCGAACTCTCAAAAAGTCGGACAAGGCCTGCC    800

BSNT_04224___    801 GCTTTGGCTGCCAAAAGGCGCGACAATCCGCCGCGTCATCGAGCGCTACA    850
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU28950___th    801 GCTTTGGCTGCCAAAAGGCGCAACAATCCGCCGCGTCATCGAGCGCTACA    850

BSNT_04224___    851 TTGTCGATAAAGAAATCAGCCTCGGCTATGAGCACGTATACACACCTGTG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    851 TTGTCGATAAAGAAATCAGCCTCGGCTATGAGCACGTATACACACCTGTG    900

BSNT_04224___    901 CTAGGCAGCAAAGAGCTGTATGAAACATCAGGACACTGGGACCATTATCA    950
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU28950___th    901 CTAGGCAGCAAAGAGCTGTATGAAACATCAGGACACTGGGATCATTATCA    950

BSNT_04224___    951 GGAAGGCATGTTCCCTCCGATGGAAATGGACAATGAAACACTTGTATTGC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th    951 GGAAGGCATGTTCCCTCCGATGGAAATGGACAATGAAACACTTGTATTGC   1000

BSNT_04224___   1001 GTCCGATGAACTGTCCGCACCATATGATGATTTACAAACAAGACATTCAC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1001 GTCCGATGAACTGTCCGCACCATATGATGATTTACAAACAAGACATTCAC   1050

BSNT_04224___   1051 AGTTACCGCGAGCTTCCGATTCGTATTGCGGAGCTTGGAACGATGCACCG   1100
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU28950___th   1051 AGTTACCGCGAGCTTCCGATTCGTATTGCAGAGCTTGGAACGATGCACCG   1100

BSNT_04224___   1101 CTATGAAATGTCAGGTGCGCTGTCAGGGCTTCAACGGGTACGCGGAATGA   1150
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU28950___th   1101 CTATGAAATGTCAGGTGCGCTGTCAGGACTTCAACGGGTACGCGGAATGA   1150

BSNT_04224___   1151 CGTTAAATGATGCACACATCTTTGTGCGCCCGGATCAAATTAAGGATGAG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1151 CGTTAAATGATGCACACATCTTTGTGCGCCCGGATCAAATTAAGGATGAG   1200

BSNT_04224___   1201 TTTATCCGTACAGTCCGTTTAATCCAGGATGTTTATGAAGACTTCGGTTT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1201 TTTATCCGTACAGTCCGTTTAATCCAGGATGTTTATGAAGACTTCGGTTT   1250

BSNT_04224___   1251 AAGTGATTACACATTCCGTCTGTCTTACCGCGATCCGGAAGATACAGAGA   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1251 AAGTGATTACACATTCCGTCTGTCTTACCGCGATCCGGAAGATACAGAGA   1300

BSNT_04224___   1301 AATATTTTGATGACGATGAAATGTGGAACAAAGCGCAATCCATGCTGAAA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1301 AATATTTTGATGACGATGAAATGTGGAACAAAGCGCAATCCATGCTGAAA   1350

BSNT_04224___   1351 GAGGCAATGGACGAAATCGGCCACGACTATTACGAAGCAGAAGGTGAAGC   1400
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU28950___th   1351 GAGGCAATGGATGAAATCGGCCACGACTATTACGAAGCAGAAGGTGAAGC   1400

BSNT_04224___   1401 GGCATTCTACGGCCCTAAACTTGATGTCCAAGTGAAAACTGCGATCGGAA   1450
                     ||||||||||||.||||||||||||||.||.|||||||||||||||||||
BSU28950___th   1401 GGCATTCTACGGACCTAAACTTGATGTTCAGGTGAAAACTGCGATCGGAA   1450

BSNT_04224___   1451 AAGAAGAAACACTGTCTACGGTACAGCTTGATTTCTTATTGCCGGAACGT   1500
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU28950___th   1451 AAGAAGAAACACTGTCTACGGTTCAGCTTGATTTCTTATTGCCGGAACGT   1500

BSNT_04224___   1501 TTCGACCTGACATACATCGGTGAGGACGGCAAGCAGCACCGTCCGGTTGT   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1501 TTCGACCTGACATACATCGGTGAGGACGGCAAGCAGCACCGTCCGGTTGT   1550

BSNT_04224___   1551 CATTCACAGAGGTGTCGTTTCAACAATGGAACGCTTTGTTGCCTTCTTAA   1600
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU28950___th   1551 CATTCACAGAGGTGTCGTTTCAACAATGGAACGCTTTGTTGCTTTCTTAA   1600

BSNT_04224___   1601 TCGAAGAACACAAAGGCGCGCTGCCGACATGGCTTGCACCGGTTCAGTTC   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1601 TCGAAGAACACAAAGGCGCGCTGCCGACATGGCTTGCACCGGTTCAGTTC   1650

BSNT_04224___   1651 CAAGTCATTCCGGTTTCTCCGGCTGTGCATTTAGACTACGCGAAAAAAGT   1700
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1651 CAAGTCATCCCGGTTTCTCCGGCTGTGCATTTAGACTACGCGAAAAAAGT   1700

BSNT_04224___   1701 GCAGGAACGCCTGCAGCGTGAAGGCCTGCGTGTTGAAGTCGACAGCCGCG   1750
                     |||||||||||||||..|||||||||||||||||||||||||||||||||
BSU28950___th   1701 GCAGGAACGCCTGCAATGTGAAGGCCTGCGTGTTGAAGTCGACAGCCGCG   1750

BSNT_04224___   1751 ATGAAAAAATCGGCTACAAAATCCGTGAAGCGCAAATGCAAAAAATCCCG   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28950___th   1751 ATGAAAAAATCGGCTACAAAATCCGTGAAGCGCAAATGCAAAAAATCCCG   1800

BSNT_04224___   1801 TACATGCTGGTGGTCGGTGACCAAGAAGCAGAAAACGGCGCGGTAAACGT   1850
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU28950___th   1801 TACATGCTGGTGGTCGGTGACCAAGAAGCAGAAAACGGAGCGGTAAACGT   1850

BSNT_04224___   1851 GCGTAAATACGGAGAGCAGAACTCTGAAACGATTTCTCTTGATGAGTTTG   1900
                     |||||||||||||||.||||||||||||||.|||||.|||||||||||||
BSU28950___th   1851 GCGTAAATACGGAGAACAGAACTCTGAAACCATTTCACTTGATGAGTTTG   1900

BSNT_04224___   1901 TGAAAAAGGCAGTAGCTGAAGCGAAAAAATAA   1932
                     ||||||||||||||||||||||||||||||||
BSU28950___th   1901 TGAAAAAGGCAGTAGCTGAAGCGAAAAAATAA   1932


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