Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04252 and BSU29120

See Amino acid alignment / Visit BSNT_04252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:45
# Commandline: needle
#    -asequence dna-align/BSNT_04252___mdh.1.22522.seq
#    -bsequence dna-align/BSU29120___mdh.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04252___mdh-BSU29120___mdh.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04252___mdh-BSU29120___mdh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04252___mdh
# 2: BSU29120___mdh
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 939
# Identity:     931/939 (99.1%)
# Similarity:   931/939 (99.1%)
# Gaps:           0/939 ( 0.0%)
# Score: 4623.0
# 
#
#=======================================

BSNT_04252___      1 ATGGGAAATACTCGTAAAAAAGTTTCTGTTATCGGAGCAGGTTTTACCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md      1 ATGGGAAATACTCGTAAAAAAGTTTCTGTTATCGGAGCAGGTTTTACCGG     50

BSNT_04252___     51 AGCTACAACTGCATTTTTAATCGCTCAAAAAGAGCTGGCAGACGTTGTTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md     51 AGCTACAACTGCATTTTTAATCGCTCAAAAAGAGCTGGCAGACGTTGTTC    100

BSNT_04252___    101 TTGTTGACATTCCGCAATTGGAGAACCCGACAAAGGGAAAAGCGCTTGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    101 TTGTTGACATTCCGCAATTGGAGAACCCGACAAAGGGAAAAGCGCTTGAT    150

BSNT_04252___    151 ATGCTTGAAGCAAGCCCGGTTCAAGGCTTTGACGCAAAAATTACGGGAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    151 ATGCTTGAAGCAAGCCCGGTTCAAGGCTTTGACGCAAAAATTACGGGAAC    200

BSNT_04252___    201 ATCCAATTACGAGGATACAGCTGGCTCTGACATTGTTGTCATTACAGCCG    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU29120___md    201 ATCCAATTACGAGGATACAGCCGGCTCTGACATTGTTGTCATTACAGCCG    250

BSNT_04252___    251 GTATCGCAAGAAAACCTGGTATGAGCAGAGATGATCTGGTCTCTTCAAAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU29120___md    251 GTATCGCAAGAAAACCTGGTATGAGCAGAGATGATCTGGTCTCTACAAAC    300

BSNT_04252___    301 GAAAAGATTATGAGAAGCGTTACCCGGGAAATCGTGAAATATTCTCCTGA    350
                     |||||||||||||||||||||||.|.||||||||||||||||||||||||
BSU29120___md    301 GAAAAGATTATGAGAAGCGTTACGCAGGAAATCGTGAAATATTCTCCTGA    350

BSNT_04252___    351 CTCTATTATTGTGGTGCTGACAAATCCTGTTGATGCAATGACATACGCGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    351 CTCTATTATTGTGGTGCTGACAAATCCTGTTGATGCAATGACATACGCGG    400

BSNT_04252___    401 TGTACAAAGAATCAGGCTTCCCTAAAGAGCGTGTAATCGGCCAGTCCGGT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU29120___md    401 TGTACAAAGAATCAGGCTTCCCTAAAGAGCGTGTAATCGGCCAGTCAGGT    450

BSNT_04252___    451 GTGCTTGATACGGCAAGATTCAGAACATTTGTGGCAGAGGAATTAAACCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    451 GTGCTTGATACGGCAAGATTCAGAACATTTGTGGCAGAGGAATTAAACCT    500

BSNT_04252___    501 GTCAGTGAAAGATGTGACTGGTTTCGTACTCGGCGGACACGGTGACGATA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    501 GTCAGTGAAAGATGTGACTGGTTTCGTACTCGGCGGACACGGTGACGATA    550

BSNT_04252___    551 TGGTGCCGCTTGTGCGTTATTCTTATGCTGGCGGTATCCCGCTTGAAACT    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    551 TGGTTCCGCTTGTGCGTTATTCTTATGCTGGCGGTATCCCGCTTGAAACT    600

BSNT_04252___    601 CTTATTCCGAAAGAACGGATTGACGCAATTGTGGAGCGCACTAGAAAAGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    601 CTTATTCCGAAAGAACGGATTGACGCAATTGTGGAGCGCACTAGAAAAGG    650

BSNT_04252___    651 CGGAGGCGAAATCGTGAATCTTCTTGGAAACGGAAGCGCGTATTATGCGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    651 CGGAGGCGAAATCGTGAATCTTCTTGGAAACGGAAGCGCGTATTATGCGC    700

BSNT_04252___    701 CTGCGGCTTCTCTGACAGAAATGGTCGAAGCGATCTTGAAAGATCAGCGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    701 CTGCGGCTTCTCTGACAGAAATGGTCGAAGCGATCTTGAAAGATCAGCGC    750

BSNT_04252___    751 CGCGTCCTTCCTACAATTGCTTATCTTGAAGGGGAATACGGCTATGAAGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    751 CGCGTCCTTCCTACAATTGCTTATCTTGAAGGGGAATACGGCTATGAAGG    800

BSNT_04252___    801 CATCTACCTTGGTGTTCCTACAATTATAGGCGGCAACGGTCTTGAGCAAA    850
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU29120___md    801 CATCTACCTTGGTGTTCCTACAATTGTAGGCGGCAACGGTCTTGAGCAAA    850

BSNT_04252___    851 TCATTGAACTTGAACTGACAGACTATGAAAGAGCGCAGCTGAATAAATCA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29120___md    851 TCATTGAACTTGAACTGACAGACTATGAAAGAGCGCAGCTGAATAAATCA    900

BSNT_04252___    901 GTAGAATCTGTCAAAAATGTCATGAAAGTATTATCCTAA    939
                     ||.||||||||||||||||||||||||||||||||||||
BSU29120___md    901 GTTGAATCTGTCAAAAATGTCATGAAAGTATTATCCTAA    939


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