Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04253 and BSU29130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence dna-align/BSNT_04253___icd.1.22522.seq
# -bsequence dna-align/BSU29130___icd.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04253___icd-BSU29130___icd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04253___icd-BSU29130___icd.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04253___icd
# 2: BSU29130___icd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1272
# Identity: 1266/1272 (99.5%)
# Similarity: 1266/1272 (99.5%)
# Gaps: 0/1272 ( 0.0%)
# Score: 6306.0
#
#
#=======================================
BSNT_04253___ 1 GTGGCACAAGGTGAAAAAATTACAGTCTCTAACGGAGTATTAAACGTACC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 1 GTGGCACAAGGTGAAAAAATTACAGTCTCTAACGGAGTATTAAACGTACC 50
BSNT_04253___ 51 AAACAACCCGATTATCCCATTTATCGAAGGAGACGGAACTGGTCCTGATA 100
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU29130___ic 51 AAACAACCCGATTATCCCATTTATCGAAGGAGACGGAACCGGTCCTGATA 100
BSNT_04253___ 101 TTTGGAACGCGGCTTCGAAGGTTTTAGAAGCAGCAGTAGAAAAAGCATAC 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU29130___ic 101 TTTGGAACGCGGCTTCGAAGGTTTTGGAAGCAGCAGTAGAAAAAGCATAC 150
BSNT_04253___ 151 AAAGGCGAAAAGAAAATTACATGGAAAGAAGTTTACGCCGGAGAAAAGGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 151 AAAGGCGAAAAGAAAATTACATGGAAAGAAGTTTACGCCGGAGAAAAGGC 200
BSNT_04253___ 201 TTATAATAAAACAGGTGAGTGGCTCCCTGCTGAAACATTAGATGTGATCC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 201 TTATAATAAAACAGGTGAGTGGCTCCCTGCTGAAACATTAGATGTGATCC 250
BSNT_04253___ 251 GCGAATATTTCATCGCGATTAAAGGCCCGTTAACGACACCTGTCGGCGGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 251 GCGAATATTTCATCGCGATTAAAGGCCCGTTAACGACACCTGTCGGCGGC 300
BSNT_04253___ 301 GGTATCCGTTCTTTGAACGTAGCGCTCAGACAAGAGCTTGACCTATTCGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 301 GGTATCCGTTCTTTGAACGTAGCGCTCAGACAAGAGCTTGACCTATTCGT 350
BSNT_04253___ 351 CTGCTTAAGACCTGTAAGATACTTTACTGGAGTGCCGTCACCGGTAAAAC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 351 CTGCTTAAGACCTGTAAGATACTTTACTGGAGTGCCGTCACCGGTAAAAC 400
BSNT_04253___ 401 GCCCTGAAGATACTGATATGGTCATCTTCCGTGAAAATACAGAAGATATT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 401 GCCCTGAAGATACTGATATGGTCATCTTCCGTGAAAATACAGAAGATATT 450
BSNT_04253___ 451 TACGCAGGCATCGAGTATGCAAAAGGCTCTGAAGAAGTGCAAAAGCTTAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 451 TACGCAGGCATCGAGTATGCAAAAGGCTCTGAAGAAGTGCAAAAGCTTAT 500
BSNT_04253___ 501 CAGCTTCCTTCAAAATGAGTTAAACGTCAATAAAATCCGTTTCCCTGAGA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 501 CAGCTTCCTTCAAAATGAGTTAAACGTCAATAAAATCCGTTTCCCTGAGA 550
BSNT_04253___ 551 CATCAGGTATCGGCATTAAGCCTGTTTCAGAAGAAGGAACAAGCCGCTTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 551 CATCAGGTATCGGCATTAAGCCTGTTTCAGAAGAAGGAACAAGCCGCTTG 600
BSNT_04253___ 601 GTCAGAGCTGCCATTGATTATGCGATCGAGCATGGCCGCAAATCTGTAAC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 601 GTCAGAGCTGCCATTGATTATGCGATCGAGCATGGCCGCAAATCTGTAAC 650
BSNT_04253___ 651 GCTTGTTCACAAAGGAAACATCATGAAGTTCACAGAAGGCGCGTTCAAAA 700
.|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU29130___ic 651 ACTTGTTCACAAAGGAAACATCATGAAGTTCACAGAAGGCGCCTTCAAAA 700
BSNT_04253___ 701 ACTGGGGCTATGAACTTGCTGAAAAAGAATACGGAGATAAAGTCTTCACA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 701 ACTGGGGCTATGAACTTGCTGAAAAAGAATACGGAGATAAAGTCTTCACA 750
BSNT_04253___ 751 TGGGCTCAATATGACCGCATTGCTGAAGAAGAAGGAAAAGACGCTGCCAA 800
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU29130___ic 751 TGGGCTCAATATGACCGCATTGCTGAAGAACAAGGAAAAGACGCTGCCAA 800
BSNT_04253___ 801 CAAAGCGCAAAGCGAAGCGGAAGCAGCAGGAAAAATCATTATCAAAGACA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 801 CAAAGCGCAAAGCGAAGCGGAAGCAGCAGGAAAAATCATTATCAAAGACA 850
BSNT_04253___ 851 GCATTGCTGACATTTTCCTTCAGCAGATCTTAACGCGTCCAAACGAGTTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 851 GCATTGCTGACATTTTCCTTCAGCAGATCTTAACGCGTCCAAACGAGTTT 900
BSNT_04253___ 901 GATGTCGTTGCGACAATGAACTTGAACGGAGATTACATTTCTGATGCTCT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 901 GATGTCGTTGCGACAATGAACTTGAACGGAGATTACATTTCTGATGCTCT 950
BSNT_04253___ 951 TGCTGCGCAAGTCGGCGGAATCGGCATTGCTCCTGGAGCGAACATCAACT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 951 TGCTGCGCAAGTCGGCGGAATCGGCATTGCTCCTGGAGCGAACATCAACT 1000
BSNT_04253___ 1001 ACGAAACAGGACATGCGATTTTCGAGGCGACGCACGGAACGGCTCCTAAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 1001 ACGAAACAGGACATGCGATTTTCGAGGCGACGCACGGAACGGCTCCTAAA 1050
BSNT_04253___ 1051 TATGCAGGCCTTGATAAAGTAAACCCATCTTCAGTTATTCTTTCAGGCGT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 1051 TATGCAGGCCTTGATAAAGTAAACCCATCTTCAGTTATTCTTTCAGGCGT 1100
BSNT_04253___ 1101 TCTGCTTCTTGAGCATTTAGGATGGAACGAAGCGGCTGATTTGGTTATCA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 1101 TCTGCTTCTTGAGCATTTAGGATGGAACGAAGCGGCTGATTTGGTTATCA 1150
BSNT_04253___ 1151 AATCTATGGAAAAAACAATCGCTTCCAAAGTCGTAACTTACGATTTTGCC 1200
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU29130___ic 1151 AATCTATGGAAAAAACAATCGCTTCTAAAGTCGTAACTTACGATTTTGCC 1200
BSNT_04253___ 1201 AGATTAATGGACGGGGCGACTGAAGTGAAATGTTCAGAGTTCGGAGAAGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29130___ic 1201 AGATTAATGGACGGGGCGACTGAAGTGAAATGTTCAGAGTTCGGAGAAGA 1250
BSNT_04253___ 1251 ACTGATCAAAAACATGGACTAA 1272
||||||||||||||||||||||
BSU29130___ic 1251 ACTGATCAAAAACATGGACTAA 1272
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