Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04258 and BSU29160
See
Amino acid alignment /
Visit
BSNT_04258 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:46
# Commandline: needle
# -asequence dna-align/BSNT_04258___ytvI.1.22522.seq
# -bsequence dna-align/BSU29160___ytvI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04258___ytvI-BSU29160___ytvI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04258___ytvI-BSU29160___ytvI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04258___ytvI
# 2: BSU29160___ytvI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity: 1106/1116 (99.1%)
# Similarity: 1106/1116 (99.1%)
# Gaps: 0/1116 ( 0.0%)
# Score: 5490.0
#
#
#=======================================
BSNT_04258___ 1 GTGAATCAATCTTATATCACTATTTTTTTCAGAACCCTCTTTGTCATATC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 1 GTGAATCAATCTTATATCACTATTTTTTTCAGAACCCTCTTTGTCATATC 50
BSNT_04258___ 51 AATGACCGCAGGGTCGATAGCTGCGGCCTATTATTCGTTTCCGTTAACTT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 51 AATGACCGCAGGGTCGATAGCTGCGGCCTATTATTCGTTTCCGTTAACTT 100
BSNT_04258___ 101 ATCCGTTCCTGATCGCCCTTATTCTTTCTTCAGTGATTCATCCTGTTGTC 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU29160___yt 101 ATCCGTTCCTGATCGCCCTTATTCTATCTTCAGTGATTCATCCTGTTGTC 150
BSNT_04258___ 151 GATTATTTGGACAAAGTGACAGGATTCCCCCGAACGATAAATGTTCTGGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 151 GATTATTTGGACAAAGTGACAGGATTCCCCCGAACGATAAATGTTCTGGG 200
BSNT_04258___ 201 CGTTCTTGCTTTTTTTCTGCTCGCAGCCTTCGGCGTCCTTACCATTCTGG 250
||||||||||||||||||||||||||||||||||||.||.||||||||||
BSU29160___yt 201 CGTTCTTGCTTTTTTTCTGCTCGCAGCCTTCGGCGTGCTCACCATTCTGG 250
BSNT_04258___ 251 TAGCCGAAATCGTAACGGGAACAGCCTATCTAGCAAAAACGCTGCCTCCG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 251 TAGCCGAAATCGTAACGGGAACAGCCTATCTAGCAAAAACGCTGCCTCCG 300
BSNT_04258___ 301 CATATCAGCACGTTTATTTCATATTGCGAAAAATTGTTTACAACTCATAT 350
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU29160___yt 301 CATATCAGCACGTTTATTTCATATTGCGAAAAATTGTTTACCACTCATAT 350
BSNT_04258___ 351 TCAGCCGCTCTATAACGAGTTAACTCTTTTGTTTCAAGAATTGGAAACGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 351 TCAGCCGCTCTATAACGAGTTAACTCTTTTGTTTCAAGAATTGGAAACGA 400
BSNT_04258___ 401 ACCAGCAGGCTTCCATCGTCACTCATATCCAGACACTCGGAGATTCTGCC 450
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU29160___yt 401 ACCAGCAGGCTTCCATCGTCACTCATATCCAGACACTCGGTGATTCTGCC 450
BSNT_04258___ 451 GCTAAAAATGCCGGGCTCCTGCTGTCCCACATTCTAGAGATGATCCCGAG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 451 GCTAAAAATGCCGGGCTCCTGCTGTCCCACATTCTAGAGATGATCCCGAG 500
BSNT_04258___ 501 ATTTTTCGCTCTTCTTCCCAATACGGCGGCGGTTCTGATTTTTTCTCTTC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 501 ATTTTTCGCTCTTCTTCCCAATACGGCGGCGGTTCTGATTTTTTCTCTTC 550
BSNT_04258___ 551 TGGCAACCTTTTTTATGACAAAGGATTGGCATAAGCTGAAAGCCATGCTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 551 TGGCAACCTTTTTTATGACAAAGGATTGGCATAAGCTGAAAGCCATGCTT 600
BSNT_04258___ 601 GTTTTAATTCTGCCGGATCGTGTGACAGCTAACAGCAAAGCGATCAGCAG 650
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU29160___yt 601 GTTTTAATTCTGCCGGATCGTGTGACAGCTAACAGCAAAGCAATCAGCAG 650
BSNT_04258___ 651 CGAATTAAAAAAAGCAATGACTGGTTTTATCAAAGCACAAGCCGTCCTCG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 651 CGAATTAAAAAAAGCAATGACTGGTTTTATCAAAGCACAAGCCGTCCTCG 700
BSNT_04258___ 701 TTTTCATCACGATGGTGATTGTATTTATCGGCCTTTCTCTCTTAAAGGTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 701 TTTTCATCACGATGGTGATTGTATTTATCGGCCTTTCTCTCTTAAAGGTT 750
BSNT_04258___ 751 GAACACGCCGCAACAATTGCTTTTTTAATCGGGCTTGTAGATCTTCTCCC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 751 GAACACGCCGCAACAATTGCTTTTTTAATCGGGCTTGTAGATCTTCTCCC 800
BSNT_04258___ 801 TTACTTAGGTGCCGGCTCCGTATTTGTGCCCTGGATTTTGTATTTATCGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 801 TTACTTAGGTGCCGGCTCCGTATTTGTGCCCTGGATTTTGTATTTATCGA 850
BSNT_04258___ 851 TTACGGGCCAGCTGCCCCAAGCGATCGGAATCGGTATCCTGTACCTCGTC 900
||||||||||||||||||||||.||||||||.||||||||||||||||||
BSU29160___yt 851 TTACGGGCCAGCTGCCCCAAGCAATCGGAATTGGTATCCTGTACCTCGTC 900
BSNT_04258___ 901 GTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 901 GTTCTTATTCAGCGGCAGCTGACAGAGCCCAAGATACTAAGTAAATCTAT 950
BSNT_04258___ 951 CGGGATCGATCCGCTGGCAACGCTCATCGCCCTGTTTGCCGGCTTTAAAT 1000
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU29160___yt 951 CGGGATCGATCCGCTGGCAACACTCATCGCCCTGTTTGCCGGCTTTAAAT 1000
BSNT_04258___ 1001 TATTCGGGTTTTTAGGACTGATTGCGGGACCCGCTGTACTCGTCATCATC 1050
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU29160___yt 1001 TATTCGGGTTTTTAGGACTGATTGCGGGACCGGCTGTACTCGTCATCATC 1050
BSNT_04258___ 1051 CAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATGGTCCTATATCAC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29160___yt 1051 CAAGCTTTCATCACAACAGGCGCATTAAAAGAAATATGGTCCTATATCAC 1100
BSNT_04258___ 1101 CGTTCAGCAAAAATAA 1116
||||||||||||||||
BSU29160___yt 1101 CGTTCAGCAAAAATAA 1116
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.