Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04307 and BSU29580

See Amino acid alignment / Visit BSNT_04307 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence dna-align/BSNT_04307.1.22522.seq
#    -bsequence dna-align/BSU29580___ytbJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04307-BSU29580___ytbJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04307-BSU29580___ytbJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04307
# 2: BSU29580___ytbJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1206
# Identity:    1197/1206 (99.3%)
# Similarity:  1197/1206 (99.3%)
# Gaps:           0/1206 ( 0.0%)
# Score: 5949.0
# 
#
#=======================================

BSNT_04307         1 ATGAATTACGATCATATATTAATTCGTTTTGGGGAAATTTCGACCAAAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt      1 ATGAATTACGATCATATATTAATTCGTTTTGGGGAAATTTCGACCAAAGG     50

BSNT_04307        51 CAAAAACAGAAAAAGCTTTATTGAGCGCTTAAAACAAAACATCAGACTCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt     51 CAAAAACAGAAAAAGCTTTATTGAGCGCTTAAAACAAAACATCAGACTCG    100

BSNT_04307       101 TTTTGAAAGACTATCCGAATTTAAAATACTTTTCCAACAGGGATCGTATG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    101 TTTTGAAAGACTATCCGAATTTAAAATACTTTTCCAACAGGGATCGTATG    150

BSNT_04307       151 ACGATTACATTAAATGGAGAGGATCCTGAGGCTCTTTTTCCTCATTTAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    151 ACGATTACATTAAATGGAGAGGATCCTGAGGCTCTTTTTCCTCATTTAAA    200

BSNT_04307       201 GCAAGTGTTTGGGATTCAAAGCTTCAGCCTGGCAATTAAGTGTGACAGCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    201 GCAAGTGTTTGGGATTCAAAGCTTCAGCCTGGCAATTAAGTGTGACAGCC    250

BSNT_04307       251 GCCTTGATGATATTAAGGCAACCGCACTAAAGGCTATCAAAGATCAGTAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    251 GCCTTGATGATATTAAGGCAACCGCACTAAAGGCTATCAAAGATCAGTAT    300

BSNT_04307       301 AAACCAGGTGATACGTTTAAAGTCGCGACAAAGAGAGCGTATAAGCAATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    301 AAACCAGGTGATACGTTTAAAGTCGCGACAAAGAGAGCGTATAAGCAATT    350

BSNT_04307       351 TGAATTAGATACAAACCAAATGAACGCTGAAATCGGCGGCCATATTTTGC    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU29580___yt    351 TGAATTAGATACAAACCAGATGAACGCTGAAATCGGCGGCCATATTTTGC    400

BSNT_04307       401 GAAATACAGAAGGATTGACGGTCGATGTTCGCAACCCAGACATCCCGCTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    401 GAAATACAGAAGGATTGACGGTCGATGTTCGCAACCCAGACATCCCGCTC    450

BSNT_04307       451 AGAATCGAAATCAGGGAAGAAGCAACATTTTTGACAATTCGTGATGAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    451 AGAATCGAAATCAGGGAAGAAGCAACATTTTTGACAATTCGTGATGAAAA    500

BSNT_04307       501 AGGTGCAGGCGGGTTGCCAGTTGGTTCAGCAGGAAAAGCGATGCTGATGC    550
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU29580___yt    501 AGGTGCAGGCGGGCTGCCAGTTGGTTCAGCAGGAAAAGCGATGCTGATGC    550

BSNT_04307       551 TTTCTGGCGGTTTTGACAGCCCTGTTGCCGGTTTTTATGCGATGAAACGG    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU29580___yt    551 TTTCTGGCGGTTTTGACAGCCCTGTGGCCGGTTTTTATGCGATGAAACGG    600

BSNT_04307       601 GGCTTGTCGGTAGAAGCTGTTCATTTCTTCAGCCCGCCATACACAAGCGA    650
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    601 GGATTGTCGGTAGAAGCTGTTCATTTCTTCAGCCCGCCATACACAAGCGA    650

BSNT_04307       651 GCGCGCAAAGCAAAAGGTAATGGATCTGGCGAAATGTCTGTCCCGTTTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    651 GCGCGCAAAGCAAAAGGTAATGGATCTGGCGAAATGTCTGTCCCGTTTTG    700

BSNT_04307       701 GGGGAAGCATGACACTTCATATTGTTCCATTTACAAAAACGCAAGAGCTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    701 GGGGAAGCATGACACTTCATATTGTTCCATTTACAAAAACGCAAGAGCTC    750

BSNT_04307       751 ATTCAAAAACAAATTCCTGAAAATTACACAATGACGGCAACCCGCCGCCT    800
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    751 ATCCAAAAACAAATTCCTGAAAATTACACAATGACGGCAACCCGCCGCCT    800

BSNT_04307       801 CATGCTTCAGATCGCCGACAGAATCAGAGAAAAGAGAAACGGGCTTGCCG    850
                     ||||||||||||.||||||||||||||||||||||||||||||||||||.
BSU29580___yt    801 CATGCTTCAGATAGCCGACAGAATCAGAGAAAAGAGAAACGGGCTTGCCA    850

BSNT_04307       851 TTATTACGGGAGAAAGCCTCGGTCAGGTAGCGAGCCAAACGCTTGAAAGC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    851 TTATTACGGGAGAAAGCCTCGGTCAGGTAGCGAGCCAAACGCTTGAAAGC    900

BSNT_04307       901 ATGTATGCAATTAATGCGGTGACGTCAACACCGATTTTGCGTCCGCTAAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    901 ATGTATGCAATTAATGCGGTGACGTCAACACCGATTTTGCGTCCGCTAAT    950

BSNT_04307       951 CGCCATGGACAAAACAGAAATCATCGAAAAATCACGGGAAATTGGCACAT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt    951 CGCCATGGACAAAACAGAAATCATCGAAAAATCACGGGAAATTGGCACAT   1000

BSNT_04307      1001 ATGAGACAAGCATTCAGCCGTTTGAAGACTGCTGCACGATCTTTACACCG   1050
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU29580___yt   1001 ATGAGACAAGTATTCAGCCGTTTGAAGACTGCTGCACGATCTTTACACCG   1050

BSNT_04307      1051 CCAAGCCCGAAAACACGCCCTAAAAAAGAGAAAATTGAACACTTTGAAAG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt   1051 CCAAGCCCGAAAACACGCCCTAAAAAAGAGAAAATTGAACACTTTGAAAG   1100

BSNT_04307      1101 CTTTGTTGATTTCGAGCCGTATATTCAAGAAGCGGTAGATAACATTGAGA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29580___yt   1101 CTTTGTTGATTTCGAGCCGTATATTCAAGAAGCGGTAGATAACATTGAGA   1150

BSNT_04307      1151 CAATGACCCTGTATAGCGAACAAGAAGCTAACGATAAATTCGCTGAACTC   1200
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU29580___yt   1151 CAATGACCCTTTATAGCGAACAAGAAGCTAACGATAAATTCGCTGAACTC   1200

BSNT_04307      1201 TTTTAA   1206
                     ||||||
BSU29580___yt   1201 TTTTAA   1206


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