Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04362 and BSU29920

See Amino acid alignment / Visit BSNT_04362 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence dna-align/BSNT_04362___ytmP.1.22522.seq
#    -bsequence dna-align/BSU29920___ytmP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04362___ytmP-BSU29920___ytmP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04362___ytmP-BSU29920___ytmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04362___ytmP
# 2: BSU29920___ytmP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 798
# Identity:     614/798 (76.9%)
# Similarity:   614/798 (76.9%)
# Gaps:         183/798 (22.9%)
# Score: 3066.0
# 
#
#=======================================

BSNT_04362___      1 ATGAACTGGTTGGGACAATTACTAGGTAGCGATTGGGAGATCTTCCCCGC     50
                                                                       
BSU29920___yt      0 --------------------------------------------------      0

BSNT_04362___     51 CGGAGGAGCTACAGGAGATGCATATTATGCGAAACATAACGGGCAGCAGC    100
                                                                       
BSU29920___yt      0 --------------------------------------------------      0

BSNT_04362___    101 TTTTTTTAAAACGTAATAGCTCACCTTTTTTAGCTGTTTTATCCGCCGAA    150
                                                                       
BSU29920___yt      0 --------------------------------------------------      0

BSNT_04362___    151 GGCATTGTTCCGAAGCTGGTTTGGACAAAACGGATGGAAAATGGGGACGT    200
                                                      |||||||||||||||||
BSU29920___yt      1 ---------------------------------ATGGAAAATGGGGACGT     17

BSNT_04362___    201 CATTACGGCCCAGCACTGGATGACCGGCAGAGAGCTGAAGCCTAAAGACA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt     18 CATTACGGCCCAGCACTGGATGACCGGCAGAGAGCTGAAGCCTAAAGACA     67

BSNT_04362___    251 TGAGCGGACGGCCCGTTGCTGAATTGCTTCGTAAAATACACACATCGAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU29920___yt     68 TGAGCGGACGGCCCGTTGCTGAATTGCTTCGTAAAATACACACATCAAAA    117

BSNT_04362___    301 GCCTTGCTGGACATGCTGAAGAGACTTGGAAAAGAACCGCTGAACCCGGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    118 GCCTTGCTGGACATGCTGAAGAGACTTGGAAAAGAACCGCTGAACCCGGG    167

BSNT_04362___    351 GGCTCTTTTGTCTCAGCTGAAGCAGGCTGTATTTGCTGTGCAGCAATCTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    168 GGCTCTTTTGTCTCAGCTGAAGCAGGCTGTATTTGCTGTGCAGCAATCTT    217

BSNT_04362___    401 CGCCGCTGATTCAAGAAGGGATCAAGTATTTGGAAGAACACCTGCATGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    218 CGCCGCTGATTCAAGAAGGGATCAAGTATTTGGAAGAACACCTGCATGAA    267

BSNT_04362___    451 GTGCATTTCGGTGAGAAAGTCGTTTGCCATTGTGATGTCAATCATAATAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    268 GTGCATTTCGGTGAGAAAGTCGTTTGCCATTGTGATGTCAATCATAATAA    317

BSNT_04362___    501 CTGGCTATTGTCTGAAGACAACCAGCTGTATTTAATTGACTGGGACGGCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    318 CTGGCTATTGTCTGAAGACAACCAGCTGTATTTAATTGACTGGGACGGCG    367

BSNT_04362___    551 CCATGATCGCTGATCCGGCGATGGACCTCGGGCCTTTGCTGTACCACTAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    368 CCATGATCGCTGATCCGGCGATGGACCTCGGGCCTTTGCTGTACCACTAC    417

BSNT_04362___    601 GTCGAAAAGCCAGCTTGGGAGAGCTGGCTGAGCATGTACGGCATAGAGCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    418 GTCGAAAAGCCAGCTTGGGAGAGCTGGCTGAGCATGTACGGCATAGAGCT    467

BSNT_04362___    651 GACAGAAAGCCTTCGGTTGCGAATGGCTTGGTATGTGTTATCTGAAACAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    468 GACAGAAAGCCTTCGGTTGCGAATGGCTTGGTATGTGTTATCTGAAACAA    517

BSNT_04362___    701 TTACTTTCATTGCCTGGCATAAAGCAAAAGGCAATGATAAGGAATTTCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    518 TTACTTTCATTGCCTGGCATAAAGCAAAAGGCAATGATAAGGAATTTCAT    567

BSNT_04362___    751 GATGCAATGGAAGAGCTGCATATCCTCATGAAACGAATTGTTGATTAA    798
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    568 GATGCAATGGAAGAGCTGCATATCCTCATGAAACGAATTGTTGATTAA    615


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