Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04363 and BSU29930

See Amino acid alignment / Visit BSNT_04363 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_04363___amyX.1.22522.seq
#    -bsequence dna-align/BSU29930___amyX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04363___amyX-BSU29930___amyX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04363___amyX-BSU29930___amyX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04363___amyX
# 2: BSU29930___amyX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2157
# Identity:    2123/2157 (98.4%)
# Similarity:  2123/2157 (98.4%)
# Gaps:           0/2157 ( 0.0%)
# Score: 10479.0
# 
#
#=======================================

BSNT_04363___      1 ATGGTCAGCATCCGCCGCAGCTTCGAAGCGTATGTCGATGATATGAATAT     50
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU29930___am      1 ATGGTCAGCATCCGCCGCAGCTTCGAAGCGTATGTCGATGACATGAATAT     50

BSNT_04363___     51 CATTACCGTTCTGATTCCTGCTGAACAAAAGGAAATCATGACACCGCCGT    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU29930___am     51 CATTACTGTTCTGATTCCTGCTGAACAAAAGGAAATCATGACACCGCCGT    100

BSNT_04363___    101 TTCGGCTTGAGACAGAAACAACAGATTTTCCTCTGGCTGTCAGGGAGGAA    150
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU29930___am    101 TTCGGCTTGAGACAGAAATAACAGATTTTCCTCTGGCTGTCAGGGAGGAA    150

BSNT_04363___    151 TACTCCCTTGAAGCAAAATACAAGTACGTCTGCGTATCCGACCATCCTGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    151 TACTCCCTTGAAGCAAAATACAAGTACGTCTGCGTATCCGACCATCCTGT    200

BSNT_04363___    201 GACATTTGGAAAAATCCATTGCGTCAGAGCATCCAGCGGCCACAAAACGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    201 GACATTTGGAAAAATCCATTGCGTCAGAGCATCCAGCGGCCACAAAACGG    250

BSNT_04363___    251 ATCTCCAAATTGGCGCTGTCATCCGGACGTCTGCGTTTGATGACGAATTT    300
                     ||||||||||||||||.||||||||||||.|.||||||||||||||||||
BSU29930___am    251 ATCTCCAAATTGGCGCGGTCATCCGGACGGCAGCGTTTGATGACGAATTT    300

BSNT_04363___    301 TATTATGACGGAGAGCTGGGCGCCGTTTATACCGCGGATCATACCGTATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    301 TATTATGACGGAGAGCTGGGCGCCGTTTATACCGCGGATCATACCGTATT    350

BSNT_04363___    351 TAAAGTATGGGCGCCTGCTGCAACCTCAGCTGCTGTCAAGCTTTCACACC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    351 TAAAGTATGGGCGCCTGCTGCAACCTCAGCTGCTGTCAAGCTTTCACACC    400

BSNT_04363___    401 CCAATAAAAGCGGGTGCACATTCCAAATGACTCGGTTGGAAAAAGGCGTC    450
                     ||||||||||||||.|||||||||||||||||||.|||||||||||||||
BSU29930___am    401 CCAATAAAAGCGGGCGCACATTCCAAATGACTCGCTTGGAAAAAGGCGTC    450

BSNT_04363___    451 TATGCCGTTACGGTTACAGGTGACCTTCACGGATATGAGTATTTGTTTTG    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU29930___am    451 TATGCCGTTACGGTCACAGGTGACCTTCACGGATATGAGTATTTGTTTTG    500

BSNT_04363___    501 CATCTGCAACAATTCAGAATGGATGGAAACAGTTGACCCGTATGCCAAGG    550
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU29930___am    501 CATCTGCAACAATTCAGAATGGATGGAAACAGTTGACCAGTATGCCAAGG    550

BSNT_04363___    551 CTGTGACTGTAAATGGAGAGCTGGGCGTCGTCTTGCGCCCGGATCAAATG    600
                     ||||||||||||||||||||..||||||||||||||||||||||||||||
BSU29930___am    551 CTGTGACTGTAAATGGAGAGAAGGGCGTCGTCTTGCGCCCGGATCAAATG    600

BSNT_04363___    601 AAATGGACTGCTCCTCTTAAACCATTCTCACACCCTGTGGATGCCGTCAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    601 AAATGGACTGCTCCTCTTAAACCATTCTCACACCCTGTGGATGCCGTCAT    650

BSNT_04363___    651 CTATGAGACGCACCTTCGCGACTTCTCCATCCATGAAAACAGCGGCATGA    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU29930___am    651 CTATGAGACGCATCTTCGCGACTTCTCCATCCATGAAAACAGCGGCATGA    700

BSNT_04363___    701 TAAACAAGGGAAAATACTTAGCATTAACGGAAACTGATACACAAACCGCA    750
                     ||||||||||||||||||||||..|.||||||||||||||||||||||||
BSU29930___am    701 TAAACAAGGGAAAATACTTAGCGCTGACGGAAACTGATACACAAACCGCA    750

BSNT_04363___    751 AATGGCAGTTCTTCGGGACTGGCGTATGTAAAAGAGCTTGGTGTTACACA    800
                     ||||||||||||||||||.|.|||||||||||||||||||||||.|||||
BSU29930___am    751 AATGGCAGTTCTTCGGGATTAGCGTATGTAAAAGAGCTTGGTGTGACACA    800

BSNT_04363___    801 TGTGGAGCTTCTGCCGGTGAATGATTTTGCCGGAGTTGATGAAGAGAAGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    801 TGTGGAGCTTCTGCCGGTGAATGATTTTGCCGGAGTTGATGAAGAGAAGC    850

BSNT_04363___    851 CGCTTGATGCATACAATTGGGGATATAACCCGCTTCATTTCTTTGCCCCG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    851 CGCTTGATGCATACAATTGGGGATATAACCCGCTTCATTTCTTTGCCCCG    900

BSNT_04363___    901 GAGGGAAGCTATGCCTCAAACCCTCATGATCCTCAAACGAGAAAAACAGA    950
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU29930___am    901 GAGGGAAGCTATGCCTCAAATCCTCATGATCCTCAAACGAGAAAAACAGA    950

BSNT_04363___    951 GCTGAAACAAATGATCAATACCCTGCATCAGCACGGTCTGCGAGTCATTC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am    951 GCTGAAACAAATGATCAATACCCTGCATCAGCACGGTCTGCGAGTCATTC   1000

BSNT_04363___   1001 TGGATGTTGTTTTTAACCATGTGTATAAGAGGGAGAATTCCCCCTTTGAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1001 TGGATGTTGTTTTTAACCATGTGTATAAGAGGGAGAATTCCCCCTTTGAA   1050

BSNT_04363___   1051 AAGACAGTGCCCGGTTATTTTTTCCGGCACGACGAATGTGGGATGCCGTC   1100
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU29930___am   1051 AAGACAGTGCCCGGTTATTTTTTCCGGCACGACGAATGTGGGATGCCATC   1100

BSNT_04363___   1101 AAACGGCACCGGCGTTGGCAATGATATTGCATCAGAAAGAAGGATGGCAA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1101 AAACGGCACCGGCGTTGGCAATGATATTGCATCAGAAAGAAGGATGGCAA   1150

BSNT_04363___   1151 GAAAATTCATTGCGGATTGCGTGGTCTATTGGCTTGAAGAATACAATGCT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU29930___am   1151 GAAAATTCATTGCGGATTGCGTGGTCTATTGGCTTGAAGAATACAATGTT   1200

BSNT_04363___   1201 GACGGCTTCCGATTTGATCTCCTCGGCATTTTAGATATTGACACCGTGCT   1250
                     |||||||||||.||||||||||||||.|||||||||||||||||||||||
BSU29930___am   1201 GACGGCTTCCGCTTTGATCTCCTCGGGATTTTAGATATTGACACCGTGCT   1250

BSNT_04363___   1251 TTATATGAAAGAGAAAGCAACTAAGGCAAAGCCCGGAATCCTGCTTTTTG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1251 TTATATGAAAGAGAAAGCAACTAAGGCAAAGCCCGGAATCCTGCTTTTTG   1300

BSNT_04363___   1301 GAGAAGGGTGGGATCTGGCTACACCGCTGCCGCATGAACAGAAAGCTGCT   1350
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU29930___am   1301 GAGAAGGGTGGGACCTGGCTACACCGCTGCCGCATGAACAGAAAGCTGCT   1350

BSNT_04363___   1351 TTGGCGAACGCGCCAAGAATGCCGGGCATCGGCTTTTTTAATGATATGTT   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1351 TTGGCGAACGCGCCAAGAATGCCGGGCATCGGCTTTTTTAATGATATGTT   1400

BSNT_04363___   1401 TCGTGACGCTGTAAAAGGGAACACCTTTCACCTTAAGGCAGTAGGGTTTG   1450
                     ||||||||||||||||||||||||||||||||||||||||..||||||||
BSU29930___am   1401 TCGTGACGCTGTAAAAGGGAACACCTTTCACCTTAAGGCAACAGGGTTTG   1450

BSNT_04363___   1451 CGCTCGGCAGCGGTGAATCAGCACAAGCTGTGATGCATGGAATTGCCGGG   1500
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1451 CGCTCGGCAACGGTGAATCAGCACAAGCTGTGATGCATGGAATTGCCGGG   1500

BSNT_04363___   1501 TCTTCCGGATGGAAGGCATTAGCGCCGATTGTTCCGGAACCAAGCCAGTC   1550
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU29930___am   1501 TCTTCCGGATGGAAGGCATTAGCACCGATTGTTCCGGAACCAAGCCAGTC   1550

BSNT_04363___   1551 CATCAATTATGTCGAATCACACGACAATCACACCTTTTGGGATAAAATGA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1551 CATCAATTATGTCGAATCACACGACAATCACACCTTTTGGGATAAAATGA   1600

BSNT_04363___   1601 GCTTTGCGCTTCCTCAAGAAAATGACAGCCGAAAGCGAAGCAGGCAAAGG   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1601 GCTTTGCGCTTCCTCAAGAAAATGACAGCCGAAAGCGAAGCAGGCAAAGG   1650

BSNT_04363___   1651 CTTGCAGCCGCGATTATTTTGCTTGCCCAAGGGGTGCCGTTTATTCACAG   1700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1651 CTTGCAGCCGCGATTATTTTGCTTGCCCAAGGGGTGCCGTTTATTCACAG   1700

BSNT_04363___   1701 CGGCCAGGAATTTTTCCGGACGAAGCAGGGAGTGGAAAACAGCTATCAAT   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1701 CGGCCAGGAATTTTTCCGGACGAAGCAGGGAGTGGAAAACAGCTATCAAT   1750

BSNT_04363___   1751 CCAGTGACAGCATCAACCAGCTCGACTGGGATCGCCGTGAAACATTCAAA   1800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1751 CCAGTGACAGCATCAACCAGCTCGACTGGGATCGCCGTGAAACATTCAAA   1800

BSNT_04363___   1801 GAAGATGTTCACTATATCCGCAGGCTGATCTCGCTGAGAAAAGCGCATCC   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1801 GAAGATGTTCACTATATCCGCAGGCTGATCTCGCTGAGAAAAGCGCATCC   1850

BSNT_04363___   1851 TGCATTCCGTCTTAGGTCCGCTGCAGACATCCGGCGCCATCTTGAATGCT   1900
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU29930___am   1851 TGCATTCCGTCTTAGGTCCGCTGCAGACATCCAGCGCCATCTTGAATGCT   1900

BSNT_04363___   1901 TGACGCTAAAAGAACACCTTATCGCATACAGGCTTTATGATCTTGACGAG   1950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1901 TGACGCTAAAAGAACACCTTATCGCATACAGGCTTTATGATCTTGACGAG   1950

BSNT_04363___   1951 GTTGACGAATGGAAAGATATCATTGTTATCCATCACGCGAGTCCAGACTC   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   1951 GTTGACGAATGGAAAGATATCATTGTTATCCATCACGCGAGTCCAGACTC   2000

BSNT_04363___   2001 CGTCGAGTGGAGTCTGCCAAACGACATACCTTATCGGCTTTTATGTGATC   2050
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU29930___am   2001 CGTCGAGTGGAGGCTGCCAAACGACATACCTTATCGGCTTTTATGTGATC   2050

BSNT_04363___   2051 CATCAGGATTTCAGGAAGACCCGGCAGAAATTAAGAAAACGGTTGCAGTA   2100
                     ||||||||||||||||||||||..|||||||.||||||||||||||||||
BSU29930___am   2051 CATCAGGATTTCAGGAAGACCCAACAGAAATCAAGAAAACGGTTGCAGTA   2100

BSNT_04363___   2101 AACGGCATCGGAACGGTTATCTTATATTTAGCATCAGATCTTAAGAGTTT   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am   2101 AACGGCATCGGAACGGTTATCTTATATTTAGCATCAGATCTTAAGAGTTT   2150

BSNT_04363___   2151 TGCTTGA   2157
                     |||||||
BSU29930___am   2151 TGCTTGA   2157


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