Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04364 and BSU29940

See Amino acid alignment / Visit BSNT_04364 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_04364___ytlR.1.22522.seq
#    -bsequence dna-align/BSU29940___ytlR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04364___ytlR-BSU29940___ytlR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04364___ytlR-BSU29940___ytlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04364___ytlR
# 2: BSU29940___ytlR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity:     925/930 (99.5%)
# Similarity:   925/930 (99.5%)
# Gaps:           0/930 ( 0.0%)
# Score: 4605.0
# 
#
#=======================================

BSNT_04364___      1 ATGAGCCATTGGTTTTTTATTATTAATCCGACAGCAGGACATCGAAACGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt      1 ATGAGCCATTGGTTTTTTATTATTAATCCGACAGCAGGACATCGAAACGG     50

BSNT_04364___     51 CCTGCGTGTTTGGAAGTCCATTCAAAAAGAATTGATCAAACGAAAGGTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt     51 CCTGCGTGTTTGGAAGTCCATTCAAAAAGAATTGATCAAACGAAAGGTTG    100

BSNT_04364___    101 AGCACCGTTCATTTTTAACTGAACATCCGGGACACGCCGAGGTGCTCGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    101 AGCACCGTTCATTTTTAACTGAACATCCGGGACACGCCGAGGTGCTCGCC    150

BSNT_04364___    151 AGACAGATTTCAACGATACAGGAATATAAGCTGAAGCGCCTGATCGTCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    151 AGACAGATTTCAACGATACAGGAATATAAGCTGAAGCGCCTGATCGTCAT    200

BSNT_04364___    201 TGGCGGAGACGGAACCATGCATGAAGTTGTCAACGGGCTGAAAGATGTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    201 TGGCGGAGACGGAACCATGCATGAAGTTGTCAACGGGCTGAAAGATGTTG    250

BSNT_04364___    251 ACGATATTGAGCTGAGCTTTGTGCCGGCGGGCGCATATAATGATTTTTCG    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU29940___yt    251 ACGATATTGAGCTGAGCTTTGTGCCGGCGGGCGCGTATAATGATTTTTCG    300

BSNT_04364___    301 CGAGGATTCTCTATTAAAAAAATCGATCTGATACAGGAAATCAAGAAGGT    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    301 CGAGGGTTCTCTATTAAAAAAATCGATCTGATACAGGAAATCAAGAAGGT    350

BSNT_04364___    351 AAAGCGCCCGTTAACAAGAACCTTTCATTTAGGGAGCGTCAATTTCCTTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    351 AAAGCGCCCGTTAACAAGAACCTTTCATTTAGGGAGCGTCAATTTCCTTC    400

BSNT_04364___    401 AGGATAAATCACAGATTCTTTATTTTATGAATCATATCGGGATCGGGTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    401 AGGATAAATCACAGATTCTTTATTTTATGAATCATATCGGGATCGGGTTT    450

BSNT_04364___    451 GACGCATATGTCAATAAAAAGGCGATGGAATTTCCGTTGAGACGGGTTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    451 GACGCATATGTCAATAAAAAGGCGATGGAATTTCCGTTGAGACGGGTTTT    500

BSNT_04364___    501 TCTTTTTCTCCGCCTTCGATTTCTTGTGTATCCGCTTTCTCATTTGCACG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    501 TCTTTTTCTCCGCCTTCGATTTCTTGTGTATCCGCTTTCTCATTTGCACG    550

BSNT_04364___    551 CTTCGGCAACCTTTAAGCCGTTTACGTTAGCTTGTACGACGGAAGACGAG    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU29940___yt    551 CTTCGGCAACCTTTAAGCCGTTTACATTAGCTTGTACGACGGAAGACGAG    600

BSNT_04364___    601 ACGCGCGAATTTCATGATGTCTGGTTTGCGGTTGTATCCAACCATCCGTT    650
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU29940___yt    601 ACGCGCGAATTTCATGATGTCTGGTTTGCCGTTGTATCCAACCATCCGTT    650

BSNT_04364___    651 TTACGGGGGAGGCATGAAGGCGGCGCCCCTAGCAAATCCGCGCGAGAAGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    651 TTACGGGGGAGGCATGAAGGCGGCGCCCCTAGCAAATCCGCGCGAGAAGA    700

BSNT_04364___    701 CATTTGATATCGTAATCGTTGAAAACCAGCCGTTTTTGAAAAAATATTGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    701 CATTTGATATCGTAATCGTTGAAAACCAGCCGTTTTTGAAAAAATATTGG    750

BSNT_04364___    751 CTTTTATGTCTCATGGCATTTGGAAAACATACAAAGATGGATGGCGTTAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    751 CTTTTATGTCTCATGGCATTTGGAAAACATACAAAGATGGATGGCGTTAC    800

BSNT_04364___    801 GATGTTTAAAGCGAAGGACATTACATTTTACACGAAGGACAAAATCCCGT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29940___yt    801 GATGTTTAAAGCGAAGGACATTACATTTTACACGAAGGACAAAATCCCGT    850

BSNT_04364___    851 TCCATGCTGACGGAGAATTCATGGGCACTACCCCGTTTCGTCTGGCATCT    900
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU29940___yt    851 TCCATGCTGACGGAGAAATCATGGGCACTACCCCGTTTCGTCTGGCATCT    900

BSNT_04364___    901 AGTCCTTCACCCCTAAGAATCAAAACATAA    930
                     ||||||||||||||||||||||||||||||
BSU29940___yt    901 AGTCCTTCACCCCTAAGAATCAAAACATAA    930


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04364 and BSU29940

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
