Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04371 and BSU30000
See
Amino acid alignment /
Visit
BSNT_04371 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_04371___ythQ.1.22522.seq
# -bsequence dna-align/BSU30000___ythQ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04371___ythQ-BSU30000___ythQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04371___ythQ-BSU30000___ythQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04371___ythQ
# 2: BSU30000___ythQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1158
# Identity: 1124/1158 (97.1%)
# Similarity: 1124/1158 (97.1%)
# Gaps: 0/1158 ( 0.0%)
# Score: 5484.0
#
#
#=======================================
BSNT_04371___ 1 ATGAACGGGCGTACGCTCTTTTTTCGAAGGCTGTTTGACTATTACAAGTA 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU30000___yt 1 ATGAACGGGCGTACGCTCTTTTTTCGAAGGCTGTTTGACTATTATAAGTA 50
BSNT_04371___ 51 TCAGTTTAAAGTGTTGCATGCGGTCATTGACTGGACAGTCGCTCTCTATA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 51 TCAGTTTAAAGTGTTGCATGCGGTCATTGACTGGACAGTCGCTCTCTATA 100
BSNT_04371___ 101 TTGTTTTGCCGGCGATTGCTTTTGTCATCTATCAGTATATTGATTTGATG 150
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 101 TCGTTTTGCCGGCGATTGCTTTTGTCATCTATCAGTATATTGATTTGATG 150
BSNT_04371___ 151 AATGGAAGAGGCCTTCTTTATGAGTGGTCTGAAGTGGCGGAGTGGAGATG 200
||.||||||||||||||||||||||||||||||||||||||.||||||||
BSU30000___yt 151 AACGGAAGAGGCCTTCTTTATGAGTGGTCTGAAGTGGCGGAATGGAGATG 200
BSNT_04371___ 201 GCTGTACGCTGTGTGTGGGCTGATCATGTTTACAGGCTCGATTCGTACAT 250
||||||.||||||||||.||||||||||||||||||.|||||||||||||
BSU30000___yt 201 GCTGTATGCTGTGTGTGTGCTGATCATGTTTACAGGTTCGATTCGTACAT 250
BSNT_04371___ 251 TTTTAATGGAAGCGGACAAAGTGTTTTTGCTGCAAAAGAAAGAAATCATC 300
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU30000___yt 251 TTTTAATGGAAGCGGACAAAGTGTTTTTGCTGCAAAAGAAGGAAATCATC 300
BSNT_04371___ 301 TATCAACTCAAACGGTACGCGCTTTTGTATTCTTTTCTCGTCACGATGGC 350
|||||.|||||||||||.||||||||||||||||||||.|.||||.||||
BSU30000___yt 301 TATCAGCTCAAACGGTATGCGCTTTTGTATTCTTTTCTGGCCACGCTGGC 350
BSNT_04371___ 351 TAAATGGCTGCTTCTCTTTTTCATTGTCCTTCCCTTGATCAGTCATTCTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 351 TAAATGGCTGCTTCTCTTTTTCATTGTCCTTCCCTTGATCAGTCATTCTG 400
BSNT_04371___ 401 TTCACATCACATTCGCAGAAAGCACTGCTCTATTGTGTTATTTGTTTGGC 450
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 401 TTCTCATCACATTCGCAGAAAGCACTGCTCTATTGTGTTATTTGTTTGGC 450
BSNT_04371___ 451 CTTCATATATTCTTTTTATCCTTAAAGCAAGACAGGATCAGAAAGCCGCG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 451 CTTCATATATTCTTTTTATCCTTAAAGCAAGACAGGATCAGAAAGCCGCG 500
BSNT_04371___ 501 CTCTATTTCGAGATGGATTGGTGATATCCTTGTCAGAGCTATATTTTTTG 550
|||.|||||||||||||||||.||||.|||||||||||||||..||||||
BSU30000___yt 501 CTCCATTTCGAGATGGATTGGCGATACCCTTGTCAGAGCTATTCTTTTTG 550
BSNT_04371___ 551 CTGGTTCTGCTATCCTGATTGTTTTGACTCAGTGGCACTTGCTTGCGCTT 600
|||||||||||||||||||||||||.|||.||.|||||||||||||||||
BSU30000___yt 551 CTGGTTCTGCTATCCTGATTGTTTTTACTGAGCGGCACTTGCTTGCGCTT 600
BSNT_04371___ 601 TTTGGCATTTTATTTTTGCTTTTCTCAGTTATCCGCAGTTTGAAAAAGAC 650
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU30000___yt 601 TTTGGCATTTTATTTTTGTTTTTCTCAGTTATCCGCAGTTTGAAAAAGAC 650
BSNT_04371___ 651 GGCTTCGTTCACGGCTTTTGAAGCTGAGGTGACTGAAGAGAAAAAAAGCA 700
.||.||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 651 AGCCTCGTTCACGGCTTTTGAAGCTGAGGTGACTGAAGAGAAAAAAAGCA 700
BSNT_04371___ 701 GGCTTGCCCTTGCAGGACTTGTGATGATGATGAGTCAGGAGGCGGGAATG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 701 GGCTTGCCCTTGCAGGACTTGTGATGATGATGAGTCAGGAGGCGGGAATG 750
BSNT_04371___ 751 CCAAAAGTAAAAGACAGGATGAGAAGAAAACCGTTATTATACCGAAATTC 800
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU30000___yt 751 CCAAAAGTAAAAGACAGGATGAGAAGAAAACCATTATTATACCGAAATTC 800
BSNT_04371___ 801 AAAAAGGATATTTAAAAGACGAACGATCTGCACAGGCTATAAGGAATTGT 850
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU30000___yt 801 AAAAAGGATATTTAAAAGACGAACGATCTGCACAGGCTATAAGGAGTTGT 850
BSNT_04371___ 851 TTTTTAAAGTCATGCTGAGGAATGGCGAGTATGCGAGGCAGATGTACATG 900
||||||||||.|||||||||||||||||||||||.|||||||||||||||
BSU30000___yt 851 TTTTTAAAGTTATGCTGAGGAATGGCGAGTATGCAAGGCAGATGTACATG 900
BSNT_04371___ 901 CTATTGTCAGCTTTCACCGTTCTCATATTTGTTTCCCCAATTTGGCTGAA 950
|||.|||||||||||||.||||||||||||||||||||||||||||||||
BSU30000___yt 901 CTACTGTCAGCTTTCACTGTTCTCATATTTGTTTCCCCAATTTGGCTGAA 950
BSNT_04371___ 951 GGTGATTGCGCTGCTGGTATATACAGGGGTTTGCCGTTATATCCTGACGC 1000
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU30000___yt 951 GGTGATTGCGCTGCTGGTATACACAGGGGTTTGCCGTTATATCCTGACGC 1000
BSNT_04371___ 1001 TTATTTTTGACAAGGTCATGGATGCCCCTTTTTTAATTGGCACCGATAAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 1001 TTATTTTTGACAAGGTCATGGATGCCCCTTTTTTAATTGGCACCGATAAG 1050
BSNT_04371___ 1051 GAAAGGGATGAATATTATCGGGCCAGAAAAAACTGTATCAACATCCTGCA 1100
|||||.|||||||||||||||||||||||||.||||||||||||||||||
BSU30000___yt 1051 GAAAGTGATGAATATTATCGGGCCAGAAAAAGCTGTATCAACATCCTGCA 1100
BSNT_04371___ 1101 CTATGCGTTTGCCGCCTGTTGTTTTTTAGCGGCCGCTGTCTCTTTATTGT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30000___yt 1101 CTATGCGTTTGCCGCCTGTTGTTTTTTAGCGGCCGCTGTCTCTTTATTGT 1150
BSNT_04371___ 1151 TTACATAA 1158
||||||||
BSU30000___yt 1151 TTACATAA 1158
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.