Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04380 and BSU30070

See Amino acid alignment / Visit BSNT_04380 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence dna-align/BSNT_04380.1.22522.seq
#    -bsequence dna-align/BSU30070___opuD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04380-BSU30070___opuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04380-BSU30070___opuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04380
# 2: BSU30070___opuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1539
# Identity:     897/1539 (58.3%)
# Similarity:   897/1539 (58.3%)
# Gaps:         636/1539 (41.3%)
# Score: 4461.0
# 
#
#=======================================

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op      1 ATGTTGAAACATATATCTAGTGTATTTTGGATTGTGATTGCAATCACAGC     50

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op     51 TGCAGCTGTATTATGGGGTGTTATTTCTCCTGACAGCCTGCAAAATGTGT    100

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    101 CTCAATCGGCACAAGCATTTATTACCGATTCATTTGGTTGGTATTATCTT    150

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    151 TTAGTTGTCTCTTTGTTTGTCGGGTTTTGTCTCTTTTTGATTTTCAGCCC    200

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    201 GATCGGAAAAATCAAACTCGGAAAGCCTGATGAAAAACCGGAATTCGGGT    250

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    251 TATTATCATGGTTTGCCATGCTGTTCAGCGCAGGCATGGGAATCGGCTTA    300

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    301 GTATTCTACGGTGCGGCTGAACCGATCAGCCATTACGCAATTAGCTCTCC    350

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    351 ATCAGGTGAAACAGAAACCCCCCAAGCCTTCAGAGATGCACTCCGCTATA    400

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    401 CGTTTTTCCACTGGGGTTTGCACGCTTGGGCCATTTATGCCATTGTGGCA    450

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    451 TTATGCATTGCCTATTTCCAATTCCGCAAAGGCGCACCCGGGTTAATCAG    500

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    501 CAGCACACTGTCACCGATTCTCGGGGATAAAGTAAACGGACCGATCGGAA    550

BSNT_04380         0 --------------------------------------------------      0
                                                                       
BSU30070___op    551 AGGCCATTGACTGTATTGCAGTTTTCGCCACTGTTGTCGGGGTGTCAACA    600

BSNT_04380         1 ------------------------------------TTGAATTACCTGTT     14
                                                         ||||||||||||||
BSU30070___op    601 AGTCTTGGTCTTGGCGCAACCCAAATTAACGGCGGTTTGAATTACCTGTT    650

BSNT_04380        15 CGGCATTCCGAATGCGTTTATCGTCCAATTGGTTTTAATCATTATTGTGA     64
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op    651 CGGCATTCCGAATGCGTTTATCGTCCAATTGGTTTTAATCATTATTGTGA    700

BSNT_04380        65 CAGTGCTCTTTTTACTTTCTGCGTGGAGCGGACTCGGAAAAGGAATTAAG    114
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op    701 CAGTGCTCTTTTTACTTTCTGCGTGGAGCGGACTCGGAAAAGGAATTAAG    750

BSNT_04380       115 TATTTAAGCAACACAAACATGGTATTGGCCGGATTGTTAATGTTGTTTAT    164
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op    751 TATTTAAGCAACACAAACATGGTATTGGCCGGATTGTTAATGTTGTTTAT    800

BSNT_04380       165 GCTCGTTGTCGGGCCTACAGTGCTGATCATGAACTCATTTACAGATTCTA    214
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU30070___op    801 GCTCGTTGTCGGGCCTACAGTGCTGATAATGAACTCATTTACAGATTCTA    850

BSNT_04380       215 TCGGACAATACATTCAAAATATCGTTCAAATGAGCTTCAGACTGACACCG    264
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op    851 TCGGACAATACATTCAAAATATCGTTCAAATGAGCTTCAGACTGACACCG    900

BSNT_04380       265 AACGATCCTGAAAAACGCGAATGGATTAACAGCTGGACGATTTTCTATTG    314
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op    901 AACGATCCTGAAAAACGCGAATGGATTAACAGCTGGACGATTTTCTATTG    950

BSNT_04380       315 GGCATGGTGGATTTCCTGGTCTCCATTTGTCGGCATTTTCATCGCCCGTG    364
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op    951 GGCATGGTGGATTTCCTGGTCTCCATTTGTCGGCATTTTCATCGCCCGTG   1000

BSNT_04380       365 TATCCAGAGGCCGGACGATCCGAGAATTTTTAATTGGCGTCTTGGTGACA    414
                     ||||||||||||||||||||||.|||||||||||.|||||||||||||||
BSU30070___op   1001 TATCCAGAGGCCGGACGATCCGCGAATTTTTAATCGGCGTCTTGGTGACA   1050

BSNT_04380       415 CCTTGTATTTTGACATTTCTATGGTTCTCCATTTTCGGCGTATCAGCCAT    464
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op   1051 CCTTGTATTTTGACATTTCTATGGTTCTCCATTTTCGGCGTATCAGCCAT   1100

BSNT_04380       465 GGATCTCCAGCAAAAAGGCACGTTCAATGTAGCAAAGCTGTCCACTGAAA    514
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU30070___op   1101 GGATCTCCAGCAAAAAGGCGCGTTCAATGTAGCAAAGCTGTCCACTGAAA   1150

BSNT_04380       515 CGATGCTGTTCGGAACACTTGATCACTATCCGCTGACAATGGTGACATCG    564
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op   1151 CGATGCTGTTCGGAACACTTGATCACTATCCGCTGACAATGGTGACATCG   1200

BSNT_04380       565 ATCCTTGCATTGATTCTGATCGCAGTATTCTTTATCACGTCTGCTGATTC    614
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU30070___op   1201 ATCCTTGCATTGATTCTGATCGCAGTATTCTTTATCACGTCAGCTGATTC   1250

BSNT_04380       615 AGCTACATTCGTGCTGGGCATGCAGACGTCGTACGGTTCTTTAAATCCGG    664
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op   1251 AGCTACATTCGTGCTGGGCATGCAGACGTCGTACGGTTCTTTAAATCCGG   1300

BSNT_04380       665 CGAATTCTGTGAAACTCAGCTGGGGTATCATTCAGTCCGCCATGGCGGCT    714
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op   1301 CGAATTCTGTGAAACTCAGCTGGGGTATCATTCAGTCCGCCATGGCGGCT   1350

BSNT_04380       715 GTGCTCCTATATTCCGGAGGGCTTGCCGCTTTGCAGAACACAGCGATTCT    764
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op   1351 GTGCTCCTATATTCCGGAGGGCTTGCCGCTTTGCAGAACACAGCGATTCT   1400

BSNT_04380       765 GGCAGCGCTGCCGTTTTCTATCGTTATCCTGCTGATGATTGCCTCTCTCT    814
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op   1401 GGCAGCGCTGCCGTTTTCTATCGTTATCCTGCTGATGATTGCCTCTCTCT   1450

BSNT_04380       815 ATCAATCGCTCTCAAAAGAAAGAAGAGAGATCAAAAAAGCGGAGAAACTC    864
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30070___op   1451 ATCAATCGCTCTCAAAAGAAAGAAGAGAGATCAAAAAAGCGGAGAAACTC   1500

BSNT_04380       865 GATAAACCGAGAAGTCCAAGAGTGAAAAAAGCATATTAA    903
                     ||||||||.||||||||||||||||||||||||||||||
BSU30070___op   1501 GATAAACCAAGAAGTCCAAGAGTGAAAAAAGCATATTAA   1539


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