Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04383 and BSU30090

See Amino acid alignment / Visit BSNT_04383 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence dna-align/BSNT_04383.1.22522.seq
#    -bsequence dna-align/BSU30090___yteU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04383-BSU30090___yteU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04383-BSU30090___yteU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04383
# 2: BSU30090___yteU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 669
# Identity:     493/669 (73.7%)
# Similarity:   493/669 (73.7%)
# Gaps:         159/669 (23.8%)
# Score: 2335.0
# 
#
#=======================================

BSNT_04383         0 --------------------------------------------------      0
                                                                       
BSU30090___yt      1 ATGGAACATGATGGCTCACTGGGACGGATGCTGCGTTTTTGCGAATGGAT     50

BSNT_04383         1 ---------------------------GTGGC-------------GCTCG     10
                                                |||||             |||||
BSU30090___yt     51 TATGAGATTTGCGTATACAAACTTGCTGTGGCTGTTTTTTACGTTGCTCG    100

BSNT_04383        11 GT------------------------------------------------     12
                     ||                                                
BSU30090___yt    101 GTCTCGGCGTGTTTGGCATCATGCCCGCGACCGCGGCTTTATTCGCTGTC    150

BSNT_04383        13 -TGCCGAAAAGAAGCC-----GAGGACAACGTTCCGGTGCTCAAAACGTT     56
                      |||.|||..|.|.||     .||||||||||||||||||||||||||||
BSU30090___yt    151 ATGCGGAAGTGGATCCAGGGGCAGGACAACGTTCCGGTGCTCAAAACGTT    200

BSNT_04383        57 TTGGCAGGAATATAAGGGTGAATTTTTTCGTTCAAATCTGCTCGGCGCTG    106
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU30090___yt    201 TTGGCAGGAATACAAGGGTGAATTTTTTCGTTCAAATCTGCTCGGCGCTG    250

BSNT_04383       107 TACTGGCGCTCATCGGAGTGATCATTTATATTGATTTGGCCTTCATTTAT    156
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU30090___yt    251 TACTGGCGCTCATCGGAGTGATCATTTATATTGATTTGGCCTTAATTTAT    300

BSNT_04383       157 CCAAGTCATTCCCTTCTGCACATCCTGCGCTTCGCCATTATGATATTTGG    206
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU30090___yt    301 CCAAGTCATTTCCTTCTGCACATCCTGCGCTTCGCCATTATGATATTTGG    350

BSNT_04383       207 CTTTTTGTTCGTATCCATGCTTTTTTATGTGTTTCCGCTGCTTGTCCATT    256
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30090___yt    351 CTTTTTGTTCGTATCCATGCTTTTTTATGTGTTTCCGCTGCTTGTCCATT    400

BSNT_04383       257 TTGACTGGAAAAAACGTCTGTATGTGAAATTTTCGCTCTTGCTCAGTGTG    306
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30090___yt    401 TTGACTGGAAAAAACGTCTGTATGTGAAATTTTCGCTCTTGCTCAGTGTG    450

BSNT_04383       307 GCGTATTTGCAATATACGTTTGCTATGCTTGCGCTGACTGTTGCTCTTTT    356
                     ||||||||||||||||||.||.|||||||||||||||||||||||||.||
BSU30090___yt    451 GCGTATTTGCAATATACGCTTACTATGCTTGCGCTGACTGTTGCTCTCTT    500

BSNT_04383       357 TTTCTTGCTTGCGTACCTGCCGGACATTGTCCCTTTTTTCAGCGTCAGCC    406
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU30090___yt    501 TTTCTTGCTTGCGTACCTGCCGGGCATTGTCCCTTTTTTCAGCGTCAGCC    550

BSNT_04383       407 TTATCAGCTACTGTCATATGCGCATTGTTTATGCCGTGCTGCTGAAAGTG    456
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU30090___yt    551 TTATCAGCTACTGCCATATGCGCATTGTTTATGCCGTGCTGCTGAAAGTG    600

BSNT_04383       457 GAGCAGCAAGGCGGCGAGCCACAGAGGGAATCCCATATACGGAAAGCTTT    506
                     ||||||||.||||||||||||||||||.||||||||||||||||||||||
BSU30090___yt    601 GAGCAGCACGGCGGCGAGCCACAGAGGAAATCCCATATACGGAAAGCTTT    650

BSNT_04383       507 TTAA---------------    510
                     |||.               
BSU30090___yt    651 TTATCCGGAAACGAGATAA    669


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